TCONS_00061593-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00061593-protein
Unique NameTCONS_00061593-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length631

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00061593-protein ID=TCONS_00061593-protein|Name=TCONS_00061593-protein|organism=Clytia hemisphaerica|type=polypeptide|length=631bp
MYPRRRRMVHLIIICVLILSAIPLLLLYMEDVEVTLSIKHKALGRDTRAN
DGRLKSLDFGVKPRSDSKDVIGRLNRDFENRHSFSLDDSFIQDEKPLFER
LAKRDKIKTRFGSFTRKAEYENVMGNRDPRSPGERGNGYMISSASKLDKE
LEKRGYEKHAFNQLVSDRISLYRSLKDYRNPACRSKKYPTKLPSTSVIIC
FHNEAWSTLLRTVHSVINRTPPDYLKEIVLVDDASTRDDLKQALEDYIIN
LPKVNIVRLKKREGLIRARLEGAKVSKGEVLTFLDAHCECTLGWIEPLLA
KIKEKKSNVVMPVIDEISETDFHYNAVPEPFQRGVFKWRLEFTWRPIPQY
EETRRVDAADGIRTPVMAGGLFSMDRDYFYKLGSYDTGMDIWGGENIEIS
FRIWMCGGSIEMLPCSRVGHVFRPKFPYSFPSSRKGDNDVVSRNLMRVAD
VWMDDYKKHFYNIRFDLKKKEPEDTTERKQLRQNLQCKSFSWYLENIYPE
LEIPDDNFVQAGEIKNPDTTVCLDTLGKGEASVVGLYECHGQGGNQYFTL
NKKGEIKNEDNCLTINGPNLVLRECEERSRKGQRWAFKGNQIKSITQNSC
LQVRNKMNLIVGPCTSGQTQKWLWNKIEDFT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038642XLOC_038642Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00061593TCONS_00061593Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000772Ricin_B_lectin
IPR029044Nucleotide-diphossugar_trans
IPR001173Glyco_trans_2-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000772Ricin B, lectin domainSMARTSM00458ricin_3coord: 505..625
e-value: 4.4E-19
score: 79.4
IPR000772Ricin B, lectin domainPFAMPF00652Ricin_B_lectincoord: 511..622
e-value: 5.5E-22
score: 78.3
IPR000772Ricin B, lectin domainPROSITEPS50231RICIN_B_LECTINcoord: 505..625
score: 23.346
IPR000772Ricin B, lectin domainSUPERFAMILY50370Ricin B-like lectinscoord: 503..625
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 142..464
e-value: 5.3E-63
score: 212.7
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 173..500
IPR001173Glycosyltransferase 2-likePFAMPF00535Glycos_transf_2coord: 196..378
e-value: 1.4E-35
score: 122.5
NoneNo IPR availableGENE3D2.80.10.50coord: 576..626
e-value: 5.7E-5
score: 22.7
coord: 465..575
e-value: 4.8E-23
score: 81.4
NoneNo IPR availableCDDcd00161RICINcoord: 512..624
e-value: 5.22999E-22
score: 91.413
NoneNo IPR availableCDDcd02510pp-GalNAc-Tcoord: 196..498
e-value: 3.27168E-171
score: 491.719

Blast
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BLAST of TCONS_00061593-protein vs. Swiss-Prot (Human)
Match: GLT13 (Polypeptide N-acetylgalactosaminyltransferase 13 OS=Homo sapiens GN=GALNT13 PE=2 SV=2)

HSP 1 Score: 493.426 bits (1269), Expect = 6.048e-169
Identity = 254/508 (50.00%), Postives = 339/508 (66.73%), Query Frame = 0 
Query:  126 NRDPRSPGERGNGYMISSASKLDKELEKRGYEKHAFNQLVSDRISLYRSLKDYRNPACRSKKYPTKLPSTSVIICFHNEAWSTLLRTVHSVINRTPPDYLKEIVLVDDASTRDDLKQALEDYIINLP-KVNIVRLKKREGLIRARLEGAKVSKGEVLTFLDAHCECTLGWIEPLLAKIKEKKSNVVMPVIDEISETDFHYNAVPEPFQRGVFKWRLEFTWRPIPQYEETRRV-DAADGIRTPVMAGGLFSMDRDYFYKLGSYDTGMDIWGGENIEISFRIWMCGGSIEMLPCSRVGHVFRPKFPYSFPSSRKGDNDVVSRNLMRVADVWMDDYKKHFYNIRFDLKKKEPEDTTERKQLRQNLQCKSFSWYLENIYPELEIPDDNFVQAGEIKNPDTTVCLDTLGKGEASVVGLYECHGQGGNQYFTLNKKGEIKNEDNCLTI---NGPNLVLRECEERSRKGQRWAFKGNQ--IKSITQNSCL---QVRNKMNLIVGPCTSGQTQKWL 623
            +R+   PGE G   +I    K D+E  K  ++ + FN + SD I+L RSL D R   C++K YP +LP+TSV+I FHNEAWSTLLRTV+SVINR+P   L E++LVDDAS RD LK  LE+Y+ NL   V I+R+++R GLIRARL GA  SKG+V+TFLDAHCECTLGW+EPLLA+IKE +  VV P+ID IS+  F Y A  +    G F W+L F W P+PQ E  RR  D    +RTP MAGGLFS+DR+YF ++G+YD GMDIWGGEN+E+SFRIW CGGS+E++ CS VGHVFR   PY+FP    G   V+++N  R+A+VWMD++K  FY I   + K +  D + RK LR+NL+CK FSWYLENIYP+ +IP   +   GEI+N +T  CLD +G+ E   VG++ CHG GGNQ F+     EI+ +D CL +   NGP ++L+ C    R  Q W +   +  ++ +  N CL      +KM   +  C+  ++Q+WL
Sbjct:   51 SRNQEGPGEMGKAVLIP---KDDQEKMKELFKINQFNLMASDLIALNRSLPDVRLEGCKTKVYPDELPNTSVVIVFHNEAWSTLLRTVYSVINRSPHYLLSEVILVDDASERDFLKLTLENYVKNLEVPVKIIRMEERSGLIRARLRGAAASKGQVITFLDAHCECTLGWLEPLLARIKEDRKTVVCPIIDVISDDTFEYMAGSD-MTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRNYFEEIGTYDAGMDIWGGENLEMSFRIWQCGGSLEIVTCSHVGHVFRKATPYTFPG---GTGHVINKNNRRLAEVWMDEFKDFFYIISPGVVKVDYGDVSVRKTLRENLKCKPFSWYLENIYPDSQIP-RRYYSLGEIRNVETNQCLDNMGRKENEKVGIFNCHGMGGNQVFSYTADKEIRTDDLCLDVSRLNGPVIMLK-CHH-MRGNQLWEYDAERLTLRHVNSNQCLDEPSEEDKMVPTMQDCSGSRSQQWL 548
The following BLAST results are available for this feature:
BLAST of TCONS_00061593-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GLT136.048e-16950.00Polypeptide N-acetylgalactosaminyltransferase 13 O... [more]
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