TCONS_00061928-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00061928-protein
Unique NameTCONS_00061928-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length751

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00061928-protein ID=TCONS_00061928-protein|Name=TCONS_00061928-protein|organism=Clytia hemisphaerica|type=polypeptide|length=751bp
MFASINGQAQLTSLLNETYTSIGQLKSCLCSRSSRYAKTKIKGKRQERAL
SSQTLSPTINTFNNQKKYHYVASPSMPKDWFVTVAVPNTQWAHNRNYSQW
NVSHTSAETFFKNKVKPVHNGWTKKMLPNYSKGVNPIRWHSMYMSRSRLL
ALEDAANTQEYNAAAQAEYLKAILPEDPELVIRRYESGRFASNEEAKDIY
MKALLVTNRLTAEEATRRFSNQFGSSNTATTGTTNTGWNIFANQGNKPNG
TEDQPLHVIMNPKKGSFFKELVPNLLRIGLLVGVVMYGFTYMQTKMLNVS
QKEILPDQSEKKFRFTDVQGCDEAKAELQEVVEFLKSPEKFERLGAKLPG
GVLLIGPPGTGKTLLARAIAGEADVPFFFASGSEFDEMFVGVGASRVRKL
FAAAKERAPCIIFIDELDAIGGTRVTNDHQPYSRMTLNQLLVELDGFDQT
EGIIVIGATNFPEILDKALTRPGRFDSKVHVLLPDVRGRKEILNLYLAKS
PVAQDVDSGVLARGTPGLSGADLYNLINQAALRAAGLDKELITMDDLEWA
KDKIYMGPERKSAVIEEKNRTLVAFHESGHAIVAIFTPDASPVHKATVIP
RGSALGYVMQLPEKDELSWSKKQLLAKMDVCMGGRVAEEMIFGEDSITTG
ASSDMQQATKIARAMVTQYGMSEKVGTVLIDEQQEKLSPELQAVIESEVK
RLINEAYNRAKKILSTKAKEHKRLAEGLLKYETLNADELKLVIQGKALEN
K
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038829XLOC_038829Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00061928TCONS_00061928Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR005936FtsH
IPR000642Peptidase_M41
IPR003959ATPase_AAA_core
IPR003960ATPase_AAA_CS
IPR027417P-loop_NTPase
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0016020 membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0004222 metalloendopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 348..485
e-value: 5.3E-24
score: 95.7
IPR005936Peptidase, FtsHTIGRFAMTIGR01241TIGR01241coord: 271..743
e-value: 2.5E-179
score: 595.1
IPR005936Peptidase, FtsHHAMAPMF_01458FtsHcoord: 1..751
score: 31.782
IPR000642Peptidase M41PFAMPF01434Peptidase_M41coord: 543..740
e-value: 1.7E-77
score: 259.8
NoneNo IPR availableGENE3D1.10.8.60coord: 493..543
e-value: 3.5E-16
score: 58.7
NoneNo IPR availableGENE3D3.40.50.300coord: 544..739
e-value: 0.039
score: 13.1
NoneNo IPR availableGENE3D3.40.50.300coord: 289..492
e-value: 2.2E-57
score: 193.8
NoneNo IPR availableCDDcd00009AAAcoord: 320..481
e-value: 2.06837E-28
score: 111.084
NoneNo IPR availableSUPERFAMILY140990FtsH protease domain-likecoord: 564..745
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 352..481
e-value: 2.6E-40
score: 137.8
IPR003960ATPase, AAA-type, conserved sitePROSITEPS00674AAAcoord: 453..471
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 312..577

Blast
[Close]
BLAST of TCONS_00061928-protein vs. Swiss-Prot (Human)
Match: YMEL1 (ATP-dependent zinc metalloprotease YME1L1 OS=Homo sapiens GN=YME1L1 PE=1 SV=2)

HSP 1 Score: 574.318 bits (1479), Expect = 0.000e+0
Identity = 278/439 (63.33%), Postives = 343/439 (78.13%), Query Frame = 0 
Query:  311 KKFRFTDVQGCDEAKAELQEVVEFLKSPEKFERLGAKLPGGVLLIGPPGTGKTLLARAIAGEADVPFFFASGSEFDEMFVGVGASRVRKLFAAAKERAPCIIFIDELDAIGGTRVTNDHQPYSRMTLNQLLVELDGFDQTEGIIVIGATNFPEILDKALTRPGRFDSKVHVLLPDVRGRKEILNLYLAKSPVAQDVDSGVLARGTPGLSGADLYNLINQAALRAAGLDKELITMDDLEWAKDKIYMGPERKSAVIEEKNRTLVAFHESGHAIVAIFTPDASPVHKATVIPRGSALGYVMQLPEKDELSWSKKQLLAKMDVCMGGRVAEEMIFGEDSITTGASSDMQQATKIARAMVTQYGMSEKVGTVLIDEQQEKLSPELQAVIESEVKRLINEAYNRAKKILSTKAKEHKRLAEGLLKYETLNADELKLVIQGKALE 749
            K   F  V+G +EAK ELQEVVEFLK+P+KF  LG KLP G+LL+GPPGTGKTLLARA+AGEADVPF++ASGSEFDEMFVGVGASR+R LF  AK  APC+IFIDELD++GG R+ +   PYSR T+NQLL E+DGF   EG+I+IGATNFPE LD AL RPGRFD +V V  PDV+GR EIL  YL K    Q VD  ++ARGT G SGA+L NL+NQAAL+AA   KE++TM +LE++KDKI MGPER+S  I+ KN+T+ A+HESGHAI+A +T DA P++KAT++PRG  LG+V  LPE D  + ++ QLLA+MDV MGGRVAEE+IFG D ITTGASSD   ATKIA+ MVT++GMSEK+G V+      KLSPE Q+ IE E++ L+ ++Y RAK IL T AKEHK LAE LL YETL+A E+++V++GK LE
Sbjct:  334 KNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLG-VMTYSDTGKLSPETQSAIEQEIRILLRDSYERAKHILKTHAKEHKNLAEALLTYETLDAKEIQIVLEGKKLE 771
The following BLAST results are available for this feature:
BLAST of TCONS_00061928-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
YMEL10.000e+063.33ATP-dependent zinc metalloprotease YME1L1 OS=Homo ... [more]
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