TCONS_00061992-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00061992-protein
Unique NameTCONS_00061992-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length548

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00061992-protein ID=TCONS_00061992-protein|Name=TCONS_00061992-protein|organism=Clytia hemisphaerica|type=polypeptide|length=548bp
MAEKEIDQSTVLHIFVIGFHHQKGTQVEFCYPPIDFKDPLADVKEGEIFI
PRQWSALPYLAMPDGAHNYEDDHSFFHLPALTKGSKVSTDTIYGVACFRQ
IDSKKLINKDENVTRTTVQKSVCILMKTPLYSFVLSKLELVTHAYFNELD
FSKTDILVECFDRMTHQLSTMAIGESLFHMGLNIADIVAEFKEKVLVLFK
LLLLEKKVVFWGNPVKDVCKFLLSFISLFPRLLHKGLLHSTCIDGVFQQK
GTQTPHDQHGLPLDIFEEGCLFQPYISLHNMTLLRKSRVTSFIVGCSNVL
FKQQMHCPYDVLVDLETSTVNITDPELAQLLELSTEDLRFCDYITAVVEN
STETLGWEGSDDWLRLQFKAYLLCLLSTVENTPAEELNELHPFNGPFCYV
WASSNSFNLWSQRDHPGMDHFHTGHPFQGDITVSDLRLRLNHISQAFANE
ETRKKFNQAFTKTQDVVGGALNSAKIALTSARQWISGMVQDIETEMRKHQ
EQQRKSVTTSDIDASSSRMVITESQRKGEIQTIGDLIGNEDNPEVPIG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038859XLOC_038859Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00061992TCONS_00061992Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018307ABL9/DENND6_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018307AVL9/DENND6 domainPFAMPF09794Avl9coord: 11..379
e-value: 1.1E-119
score: 399.4

Blast
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BLAST of TCONS_00061992-protein vs. Swiss-Prot (Human)
Match: AVL9 (Late secretory pathway protein AVL9 homolog OS=Homo sapiens GN=AVL9 PE=1 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 7.099e-65
Identity = 106/232 (45.69%), Postives = 153/232 (65.95%), Query Frame = 0 
Query:    6 IDQSTVLHIFVIGFHHQKGTQVEFCYPPIDFKDPLADVKEGEIFIPRQWSALPYLAMPDGAHNYEDDHSFFHLPALTKGSKVSTDTIYGVACFRQIDSKKLINKDENVTRTTVQKSVCILMKTPLYSFVLSKLELVTHAYFNELDFSKTDILVECFDRMTHQLSTMAIGESLFHMGLNIADIVAEFKEKVLVLFKLLLLEKKVVFWGNPVKDVCKFLLSFISLFPRLLHKGL 237
            + +  VLHI V+GFHH+KG QVEF YPP+   D           +P +W  LP+LA+PDGAHNY++D  FFHLP           T++G++C+RQI++K L  +  ++TR TVQKSVC+L K PLY  + +KL+L+THAYF E DFS+  IL E ++ M   L   ++  S  ++GL+  D+V  F+ KVL+LFKL+LLEKKV+F+ +PV  +   L++ +SLFP ++  GL
Sbjct:   11 VPRGPVLHIVVVGFHHKKGCQVEFSYPPLIPGD-----GHDSHTLPEEWKYLPFLALPDGAHNYQEDTVFFHLPPRNGNGA----TVFGISCYRQIEAKALKVRQADITRETVQKSVCVLSKLPLYGLLQAKLQLITHAYFEEKDFSQISILKELYEHMNSSLGGASLEGSQVYLGLSPRDLVLHFRHKVLILFKLILLEKKVLFYISPVNKLVGALMTVLSLFPGMIEHGL 233

HSP 2 Score: 160.614 bits (405), Expect = 2.702e-42
Identity = 87/237 (36.71%), Postives = 132/237 (55.70%), Query Frame = 0 
Query:  257 DQHGLPLDIFEEGCLFQPYISLHNMTLLRKSRVTSFIVGCSNVLFKQQMHCPYDVLVDLETSTVNITDPELAQLLELSTEDLRFCDYITA-VVENSTETL----GWEGSDDWLRLQFKAYLLCLLSTVENTPAEELNELHPFNGPFCYVWASSNSFNLWSQRDHPGMDHFHTGHPFQGDITVSDLRLRLNHISQAFANEETRKKFNQAFTKTQDV----------VGGALNSAKIAL 478
            DQ+G+PL IF +G L  PY++L    LL    V  F+ G +N+LF+QQ H   D +V++E + + I DPEL +LL  +T DLRF DY+   V EN  +      GWEG D+W+R QF  Y+  LL+       E++  L  +   F   W +++++ +W+   HP +   +  HPFQG  +VSD++LR +H  Q   +E  +K  N   T +++V          VGGA +SAK A+
Sbjct:  394 DQYGMPLAIFTKGYLCLPYMALQQHHLLSDVTVRGFVAGATNILFRQQKHLS-DAIVEVEEALIQIHDPELRKLLNPTTADLRFADYLVRHVTENRDDVFLDGTGWEGGDEWIRAQFAVYIHALLAATLQLDNEKI--LSDYGTTFVTAWKNTHNYRVWNSNKHPALAEINPNHPFQGQYSVSDMKLRFSHSVQ--NSERGKKIGNVMVTTSRNVVQTGKAVGQSVGGAFSSAKTAM 625
The following BLAST results are available for this feature:
BLAST of TCONS_00061992-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AVL97.099e-6545.69Late secretory pathway protein AVL9 homolog OS=Hom... [more]
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