TCONS_00061998-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00061998-protein
Unique Name	TCONS_00061998-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	929

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00061998-protein ID=TCONS_00061998-protein|Name=TCONS_00061998-protein|organism=Clytia hemisphaerica|type=polypeptide|length=929bp
MASEDMDFTLENLLDLALGNPEIGAVNFNFLHEVISEILKHLGISNKSAR
VTQELDFRLALQDVAEEHRSQSPVQRKLPPSSRKTAPNNATLSGHAIGSK
GDHAEPINQVQQPIAPGGQPMLSQSPPPPYKPSENDFDGPSQSQPHGQTN
PQGQAQSQPQGQANPQPQSYDQPQSQGQAQPQLQGQGQGQAQPKPLSAQG
RPIPTSSVTPPLEDPRPLSGHANNQQQRQPSMTDARAEAAESSRSRQHIP
APPSSHSRKTSFHNSRRSSLINQRLSSLKGNPSFNDTIVRGTLERGNSQT
PAGDMWHVLNINRRVEAAEAAIQGMTNLIDNINTDLYEMRSNNSSDVIRT
QSPSFGKNLNDMSDGGEWAQAMTNMMNDLDSKMSDFNEQVSKLATKDQIE
DFRSADYINDMIKEKLETLDITKRVSKTHAPAGLSAGSEKDSGLEDALVS
KAETGISVTDAVKSVSSLKRRDSRDSRTRIAYQEVSAKMLYLEQEINKAK
GHVNSLEVMLGAKIELSDIESKLDKTDFWKVRDELNKQIKNALDQISALE
SSHRTVGEEVSALVSQTDEFTVQQRHLAKAMKKLERDLEDMTDNFHRSQT
DMAQKRSNNGLDEAAINKIRGNIFDIQEQQSKFQQNLDSLEQDSKNKDKF
LENINIEIKELQEVKVDKDYVQQQLAGKVDQGSIINKVERDHFDACVRDL
DENIQNILQKIDGTEAFTNQKMTTLEGIIGTKVDHDDLKEIHAYIDQRFK
TFKPKVQQKQRAEETAAGTKKQLIKNCNCISCDRPVEMTTGGDEIVTLPY
YQALPGVKSMRPINTFDLQTLRQHMHQTLTQGSNRQRFELSQERSRLQKE
LLQLCGVRDLDEFAVSATNRACGGEHTLIEQNRRNPTKNPNGAREDGCYG
ERQLETEVRGRDGHIYKGRLQSAHLPDIR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_038863	XLOC_038863	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00061998	TCONS_00061998	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR032013	DUF4795

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 369..389
None	No IPR available	COILS	Coil	Coil	coord: 623..643
None	No IPR available	COILS	Coil	Coil	coord: 574..601
None	No IPR available	COILS	Coil	Coil	coord: 532..552
None	No IPR available	COILS	Coil	Coil	coord: 315..335
None	No IPR available	GENE3D	3.90.20.10		coord: 256..435 e-value: 0.022 score: 14.0
None	No IPR available	GENE3D	1.20.58.90		coord: 523..672 e-value: 3.2E-4 score: 20.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 877..899
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..285
IPR032013	Protein of unknown function DUF4795	PFAM	PF16043	DUF4795	coord: 612..812 e-value: 5.6E-42 score: 143.5

Blast

[Close]

BLAST of TCONS_00061998-protein vs. Swiss-Prot (Human)
Match: QRIC2 (Glutamine-rich protein 2 OS=Homo sapiens GN=QRICH2 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.294e-31
Identity = 127/518 (24.52%), Postives = 230/518 (44.40%), Query Frame = 0

Query:  456 ISVTDAVKSVSSLKRRDSRDSRTRIAYQEVSAKMLYLEQEINKAKGHVNSLEVMLGAKIELSDIESKLDKTDFWKVRDELNKQIKNALDQISALESSHRTVGEEVSALVSQTDEFTVQQRHLAKAMKKLERDLEDMTDNFHRSQTDMAQKRSNNGLDEAAINKIRGNIFDIQEQQSKFQQNLDSLEQDSKNKDKFLENINIEIKELQEVKVDKDYVQQQLAGKVDQGSIINKVERDHFDACVRDLDENIQNILQKIDGTEAFTNQKMTTLEGIIGTKVDHDDLKEIHAYIDQRFKTFKPKVQQK---QRAEETAAGTKKQLIKNCNCISCDRPVEMTTGGDEIVTLPYYQALPGVKSMRPINTFDLQTLRQHMHQTLTQGSNRQRFELSQ-------------------------------ERSRLQKELL--QLCG------VRDLDEFAVSATNRACGGEHTL-IEQNRRNPTKNPNG--AREDGCYGERQLETEVRGRDGHIYKGRLQSAHLPDI 928
            ++V D  K ++ L  R+S+D         VS   LYL+ +++K +  + S+       + +S    K       ++  E       A     +L+ SH     +VS LV + ++                  L+DM ++   S+     K      DE  + +++  I  +Q    K      +L +D + K K +  +   +++L++ K ++++++ ++  K D+ ++  KV R  FDA    L+  +Q ++ K+ G E    + +  L   +  K+D  +L  +   ++ R+K+ + +++++    +A+E AA  ++QL+ + +C+SCDRP+E    G  I   P    LPG  S+RP   F+L+ +RQH  + L  GS   R +L+Q                                 S++ +ELL  Q  G      V D+ ++  S   R CGG HTL    +R  P   P G    E+     +  E ++ G DGHIYKGR+ +  LP I
Sbjct: 1134 VTVADIEKELAEL--RESQDRGKAAMENSVSEASLYLQDQLDKLRMIIESMLTSSSTLLSMSMAPHKAHTLAPGQIDPE-------ATCPACSLDVSH-----QVSTLVRRYEQ------------------LQDMVNSLAVSRPSKKAKLQRQ--DEELLGRVQSAILQVQGDCEKLNITTSNLIEDHRQKQKDIAMLYQGLEKLEKEKANREHLEMEIDVKADKSALATKVSRVQFDATTEQLNHMMQELVAKMSGQEQDWQKMLDRLLTEMDNKLDRLELDPVKQLLEDRWKSLRQQLRERPPLYQADEAAA-MRRQLLAHFHCLSCDRPLETPVTGHAIPVTPAGPGLPGHHSIRPYTVFELEQVRQH-SRNLKLGSAFPRGDLAQMEQSVGRLRSMHSKMLMNIEKVQIHFGGSTKASSQIIRELLHAQCLGSPCYKRVTDMADYTYSTVPRRCGGSHTLTYPYHRSRPQHLPRGLYPTEEIQIAMKHDEVDILGLDGHIYKGRMDT-RLPGI 1614

The following BLAST results are available for this feature:

BLAST of TCONS_00061998-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00061998-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
QRIC2	2.294e-31	24.52	Glutamine-rich protein 2 OS=Homo sapiens GN=QRICH2...	[more]

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TCONS_00061998-protein (polypeptide) - C. hemisphaerica