TCONS_00062002-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062002-protein
Unique NameTCONS_00062002-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length628

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062002-protein ID=TCONS_00062002-protein|Name=TCONS_00062002-protein|organism=Clytia hemisphaerica|type=polypeptide|length=628bp
MMNAVTLCLMLFIASGAGVDIAYRQTDDYQLIWSDKESKGDKDGSIWRVK
NFQTGFCSLGDVAKGSHSRPNVKALLVTAKKAGALAHPASFTKIWTDKGS
GADMSVSVWRMNPPRGYRCLGAAAMPNHHHHPDASKYCCVGHQYVTSAGV
IDEYNDKGSDSDLDGAFWRVVRKGGDSSGIYGGNFLVTTNYHSRPTAAAY
LLKASDLVKDVWSLPAVAVTPLNIYEQNKLDLIWSDRGSDADHDCTIWRA
NKRNGYYPVGDMVVRTHGRPRVGYLVQMSDPDSGDLKQPISYRQIWSDKG
SGADMSVKVWRANCPSGYVALGDIATGGHYPKGGEMYCVRSKYAAYTAAS
NWQWVWNDKGSGSDTDVTFFEAITRGNRLLQSTRGMGSKVGHHGTPHYAP
FILKKSDTTYYAEKPIREIKLRNMRYDLSKKKISGKAPQEIIPTVVNNMS
SKEQKGGRTIEVQTSKTSSFEMSRSISFGLSMEVSGDVPIIGGGGFSVTT
NFETSKSYTTGKSKTVTKTDSVTAEIVLPPYSRSTAYIVGNQYKADIPYI
ATVTKVYFDGTESTQEMSGVFKGVQIAEYEITYGEITKIPENERKXSQST
KLLLVRLQKSLRTKENQFLANGRSSILI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038865XLOC_038865Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062002TCONS_00062002Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009291Vps62
IPR005830Aerolysn
Vocabulary: Biological Process
TermDefinition
GO:0009405pathogenesis
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009405 pathogenesis
cellular_component GO:0005576 extracellular region
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009291Vacuolar protein sorting-associated protein 62PFAMPF06101Vps62coord: 221..377
e-value: 8.1E-10
score: 37.5
coord: 22..196
e-value: 9.7E-12
score: 43.9
IPR005830AerolysinPFAMPF01117Aerolysincoord: 419..557
e-value: 2.1E-7
score: 30.4
NoneNo IPR availableGENE3D2.170.15.10coord: 418..588
e-value: 2.3E-28
score: 98.4
NoneNo IPR availableSUPERFAMILY56973Aerolisin/ETX pore-forming domaincoord: 419..603

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062002-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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