TCONS_00062016-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062016-protein
Unique NameTCONS_00062016-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length581

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062016-protein ID=TCONS_00062016-protein|Name=TCONS_00062016-protein|organism=Clytia hemisphaerica|type=polypeptide|length=581bp
MILLQLTLLAILANCTSAQDCTCDLISNQCDLNCCCDPDCNENDKLAFSS
CIPENVNRIEEVCVSDNILYSSNNKYQAQGNGMGMFCIYKDNYEARHLYS
NVPFVSTKASFDALADQFESSSYHSMTNNEDQTTVSTEKENLQNTFKAGD
PMYILFDNNQQGYLPLPTTFLTNECEDQNQAKFLFQNKTTCKRSVGNLQT
ECGTKKSLNAQTYINGFKVAPYPSFINGEVQFTMVTNENNATIQRVQTSR
VQSNDTNLIQPTLTTPLKCIENGLQTDCPFNDAQAPTWNGTHCENVLHEV
EYNIKYTINSTVTISEVSVAFVLGSISPPDSLMQKFSYKFEKSGVSTSND
TTTERSGNPGYLTGLPIKTGTGYTDSLTETEKINITESADVLTLMTSPSN
SLCGNPMEREEVKFGINYQATCFIQMEKTVMTTQDCVNLQNEIDNVLLPT
NLPNRVTSFGNTITQNVDQWVTVINARPNAAPTESNGYCTNMMTDVSFRI
LYSKTGFYANPQNQIVGFEINYGSLKDLQYQCPGLFCDDVNRALISQSVS
FIDVSTTPVSEVKPKPKFRSKAPNDFFYPFL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038872XLOC_038872Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062016TCONS_00062016Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011677DUF1619
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011677Domain of unknown function DUF1619PFAMPF07773DUF1619coord: 385..506
e-value: 2.1E-4
score: 21.3
coord: 21..366
e-value: 9.7E-61
score: 206.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 344..364

Blast
BLAST of TCONS_00062016-protein vs. Swiss-Prot (Human)
Match: TECT3 (Tectonic-3 OS=Homo sapiens GN=TCTN3 PE=1 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 5.437e-50
Identity = 156/573 (27.23%), Postives = 247/573 (43.11%), Query Frame = 0
Query:   21 CTCDLISNQCDLNCCCDPDCNE-NDKLAFSSCIPENVNRIEEVCVSDNILYSSNNKYQAQ----GNGMGMFCIYKDNYEARHLYSNVPFVSTKASFDALADQFESSSYHSMTNNEDQTTVSTEKENLQNTFKAGDPMYILFDN-NQQGYLPLPTTFLTNE-CEDQNQAKFLFQNKTTCKRSVGNLQTECGTKKSLNAQTYINGFKVAPYPSFINGEVQFTMVTNENNATIQRVQTSRVQSNDTNLIQPTLTTPLKCIENGLQTDCPFNDAQAPTWNGTHCENVLHEVEYNIKYTINSTVTISEVSVAFVLG----SISPPDSLMQKFSYKFEKSGVSTSNDTTTERSGNPGYLTGLPIKTGTGYTDSLTETEKINITESADVLTLMTSPSNSLCGNPMEREEVKFGINYQATCFIQMEKTVMTTQDCVNLQNEIDNVLLPTNLPNRVTSFGNTITQNVDQWVTVINARPNAAPTESNGYCTNMMTDVSFRILYSKTGFYANPQNQIVGFEINY--GSLKDLQYQCPGLFCDDVNRALISQSVSFIDVSTTPVSEVKPKPKFRSKAPNDFFYPF 580
            C CDL    CD+NCCCD DC   + +  FS C+P +V     VCV +++++ SN+ + ++     NG+  FC++ +N    +        +T  +F ALA +F   S+          T + + ++  + ++AGDP+   F   +    L  P        C + N A FL    TTC R   NL + C    +LNA +Y N                          T+ +V  S     +     P + T               + A AP   G  C+NV+ +V Y I+   N T  I +VSV+  LG    ++ P  SL Q F  +F     ST+   T+ RSGNPGY+ G P+         L  T+ I+ +     +TL+ S  N  C   ++R EV+FG+N  + C ++++K      DC +LQ EI   L     P  V  FGN        W  ++N   + +       C  +   +  ++L++  G  +NPQ  + G    Y   S++D Q          V    ++  V+F+D++  P    + +PK   K P DFF PF
Sbjct:   90 CVCDLTPGACDINCCCDRDCYLLHPRTVFSFCLPGSVRSSSWVCVDNSVIFRSNSPFPSRVFMDSNGIRQFCVHVNNSNLNYFQKLQKVNAT--NFQALAAEFGGESF----------TSTFQTQSPPSFYRAGDPILTYFPKWSVISLLRQPAGVGAGGLCAESNPAGFLESKSTTCTRFFKNLASSCTLDSALNAASYYN-------------------------FTVLKVPRSMTDPQNMEFQVPVILT---------------SQANAPLLAGNTCQNVVSQVTYEIE--TNGTFGIQKVSVS--LGQTNLTVEPGASLQQHFILRFRAFQQSTAASLTSPRSGNPGYIVGKPL---------LALTDDISYS-----MTLLQSQGNGSCS--VKRHEVQFGVNAISGCKLRLKKA-----DCSHLQQEIYQTLHGRPRPEYVAIFGNADPAQKGGWTRILNRHCSISAINCTSCCL-IPVSLEIQVLWAYVGLLSNPQAHVSGVRFLYQCQSIQDSQ---------QVTEVSLTTLVNFVDITQKP-QPPRGQPKMDWKWPFDFF-PF 573          
The following BLAST results are available for this feature:
BLAST of TCONS_00062016-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TECT35.437e-5027.23Tectonic-3 OS=Homo sapiens GN=TCTN3 PE=1 SV=2[more]
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