TCONS_00062021-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062021-protein
Unique NameTCONS_00062021-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length434

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062021-protein ID=TCONS_00062021-protein|Name=TCONS_00062021-protein|organism=Clytia hemisphaerica|type=polypeptide|length=434bp
MQHESVILILFTITSLKACPFLCNCILTWNQNNQLQNVWHCGQQGLTADK
LNLITRDHNTTDVDVLYLTSNKLKDFNGNKLKGFTTLKTLHLGENQLSII
PTSICQALPQLEVLGLENNTISAITPESFSDCNKLRHLKLSGNEVHLLLE
STFSDTKNLEDLDLSQNAIHSIYSDSLKGLLKLTRIDLSGNNIQKIPDNL
FSSSHDVQWVDLSHNQLTSFSRELTKHLLHVEELFLANNALDTLGNGVFD
GMKLKVLDLSNNEIVSLVPSMFGESVIEDLLLDGNPLQCNCNLKNILSDG
GMNPIKASGLCTFPKTVLSDNTERVLKIANLTKKLNCDNDCFKNTSCQND
GQCMLDIDKNTEIYSYQCRCSSGYHGNYCELKKKTSKTLLVIVVIVVIPV
LVLIVGLILFRRQCRRKRRHRGDMLPLTDDDFAL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038875XLOC_038875Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062021TCONS_00062021Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675L_dom-like
IPR001611Leu-rich_rpt
IPR013032EGF-like_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000742EGF-like domainSMARTSM00181egf_5coord: 340..380
e-value: 8.4E-5
score: 32.0
IPR000742EGF-like domainPFAMPF00008EGFcoord: 341..378
e-value: 1.2E-6
score: 28.6
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 338..380
score: 13.673
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 180..203
e-value: 0.0034
score: 26.6
coord: 253..274
e-value: 34.0
score: 8.9
coord: 156..179
e-value: 87.0
score: 5.5
coord: 205..227
e-value: 410.0
score: 0.0
coord: 108..131
e-value: 0.039
score: 23.1
coord: 84..107
e-value: 4.2
score: 16.4
coord: 228..251
e-value: 0.38
score: 19.8
coord: 132..155
e-value: 160.0
score: 3.4
NoneNo IPR availableSMARTSM00365LRR_sd22_2coord: 180..202
e-value: 44.0
score: 10.3
coord: 156..177
e-value: 10.0
score: 15.0
NoneNo IPR availableGENE3D2.10.25.10coord: 340..384
e-value: 2.9E-7
score: 30.0
NoneNo IPR availableCDDcd00054EGF_CAcoord: 339..380
e-value: 4.10273E-5
score: 39.9274
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 339..383
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 208..339
e-value: 1.9E-13
score: 49.4
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 136..207
e-value: 1.3E-19
score: 69.5
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 51..135
e-value: 2.0E-16
score: 59.2
IPR032675Leucine-rich repeat domain, L domain-likeSUPERFAMILY52058L domain-likecoord: 59..291
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 151..193
e-value: 1.6E-9
score: 37.3
coord: 86..144
e-value: 1.2E-13
score: 50.5
coord: 208..264
e-value: 5.6E-11
score: 41.9
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 86..107
score: 6.441
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 110..131
score: 6.618
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 158..179
score: 7.458
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 134..155
score: 5.425
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 253..274
score: 7.389
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 206..227
score: 5.479
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 62..82
score: 4.801
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 230..251
score: 4.878
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 182..203
score: 8.089
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 368..379
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 368..379

Blast
[Close]
BLAST of TCONS_00062021-protein vs. Swiss-Prot (Human)
Match: CPN2 (Carboxypeptidase N subunit 2 OS=Homo sapiens GN=CPN2 PE=1 SV=3)

HSP 1 Score: 95.5153 bits (236), Expect = 3.563e-21
Identity = 75/261 (28.74%), Postives = 121/261 (46.36%), Query Frame = 0 
Query:   63 VDVLYLTSNKLKDFNGNKLKGFTTLKTLHLGENQLSIIPTSICQALPQLEVLGLENNTISAITPESFSDCNKLRHLKLSGNEVHLLLESTFSDTKNLEDLDLSQNAIHSIYSDSLKGLLKLTRIDLSGNNIQKIPDNLFSSSHDVQWVDLSHNQLTSFSRELTKHLLHVEELFLANNALDTLGNGVF-DGMKLKVLDLSNNEIVSLVPSMF-------------------GESVIE------DLLLDGNPLQCNCNLKNIL 297
            ++ L+L  N+L+       +  T LKTL+L +N L+ +P  +   L  L+ L L NN +S +    F     L+ L L  N +  L    FS    LE L L +NAI  +       L  LT + L  N ++ +P  LF+ +  +  + L+HNQL + +     HL ++  L L+ NA+  L  G+F D  +L  L L +N + +L P++F                    E + +      +L L GNP QC+C+L  + 
Sbjct:  147 LESLHLQGNQLQALPRRLFQPLTHLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTHNQLETVAEGTFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQNLSKLELLSLSKNQLTTLPEGIFDTNYNLFNLALHGNPWQCDCHLAYLF 407
The following BLAST results are available for this feature:
BLAST of TCONS_00062021-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CPN23.563e-2128.74Carboxypeptidase N subunit 2 OS=Homo sapiens GN=CP... [more]
back to top