TCONS_00062070-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00062070-protein
Unique Name	TCONS_00062070-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	522

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00062070-protein ID=TCONS_00062070-protein|Name=TCONS_00062070-protein|organism=Clytia hemisphaerica|type=polypeptide|length=522bp
MKKLLLVLLYMVSAVHCARLSKRDWLRRHNLTCKFCEKKKNIFGLVPELE
HNHEEVIISFEAELPKCRLDDRFLSFSLDALELKRNLRCFPLESRKINTL
ARALSPAYFRVGGTPQDFLIFTEKKKIHAVENDQGPSSCHPMFENWTRMK
QFQYTHSEFEELFTFTQRNNFRLIFGLNALTRDRKGSWVISNATKAVLNK
YSGKVDWEIGNEPNRFSKYGGKTKVSARQLARDDKKLRGLLKNSKSKIYG
PDISKPSLKPLKYLKKYLAASPPIDAVTYHMYEMHQTEASVEAFLNPIYM
SKLKEQMSWIDQIVQNSSRGNLSRQKDVWVGETGSASGGGAPGFSDRFIS
GFHHLSKIGLASEFCHKVFIRQSFYGGHYGMLDPITHNPLPDYWVTLLFK
QLIKNVVLSSSANQNSFFRTHFYCSKMVAGDVVVSFVNMKQRSNFFLSVK
NYEKYPIEKYIFTNPEGLTSKNSYLNGELLRMISGERLPQMKGVDGVRQP
VEIPRLSYGFLVFKNTNVKACM

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_038899	XLOC_038899	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00062070	TCONS_00062070	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005199	Glyco_hydro_79
IPR017853	Glycoside_hydrolase_SF

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0016798	hydrolase activity, acting on glycosyl bonds

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0016798	hydrolase activity, acting on glycosyl bonds

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005199	Glycoside hydrolase, family 79	PFAM	PF03662	Glyco_hydro_79n	coord: 92..359 e-value: 4.5E-22 score: 78.3
None	No IPR available	GENE3D	3.20.20.80		coord: 93..401 e-value: 3.8E-32 score: 111.4
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 96..402

Blast

[Close]

BLAST of TCONS_00062070-protein vs. Swiss-Prot (Human)
Match: HPSE (Heparanase OS=Homo sapiens GN=HPSE PE=1 SV=2)

HSP 1 Score: 246.128 bits (627), Expect = 7.264e-75
Identity = 180/533 (33.77%), Postives = 266/533 (49.91%), Query Frame = 0

Query:   46 VPELEHNHEEVIISFEAELPKCRLDDRFLSFSLDALELKRNLRCFP-----LESRKINTLARALSPAYFRVGGTPQDFLIFTEKKKIHAVENDQGPS----------SCHPMFENWTRM---------------KQFQ---YTHSEFEELFTFTQRNNFRLIFGLNALTRDRKGSWVISNATKAVLNKYSGK---VDWEIGNEPNRFSKYGGKTKVSARQLARDDKKLRGLLKNS---KSKIYGPDISKPSLKPLKYLKKYL-AASPPIDAVTYHMYEMHQTEASVEAFLNPIYMSKLKEQMSWIDQIVQNSSRGNLSRQKDVWVGETGSASGGGAPGFSDRFISGFHHLSKIGLASEFCHKVFIRQSFYG-GHYGMLDPITHNPLPDYWVTLLFKQLIKNVVLSSS--ANQNSFFRTHFYCS-----KMVAGDVVVSFVNMKQRSNFFLSVKNYEKYPIEKYIF--TNPEGLTSKNSYLNGELLRMISGERLPQMKGVDGVRQPVE------IPRLSYGFLVFKNTNVKACM 522
            +P      + V + F  + P   +   FLS ++DA     NL   P     L S K+ TLAR LSPAY R GGT  DFLIF  KK+    E     S          S  P  E   R+               K+F+   Y+ S  + L+TF   +   LIFGLNAL R     W  SNA + +L+  S K   + WE+GNEPN F K      ++  QL  D  +L  LL+ S    +K+YGPD+ +P  K  K LK +L A    ID+VT+H Y ++   A+ E FLNP  +      +  + Q+V+++  G     K VW+GET SA GGGAP  SD F +GF  L K+GL++    +V +RQ F+G G+Y ++D    +PLPDYW++LLFK+L+   VL +S   ++    R + +C+     +   GD+ +  +N+   + +      +    ++KY+     P GL SK+  LNG  L+M+  + LP +     + +P+       +P  SY F V +N  V AC+
Sbjct:   29 LPRPAQAQDVVDLDFFTQEPLHLVSPSFLSVTIDA-----NLATDPRFLILLGSPKLRTLARGLSPAYLRFGGTKTDFLIFDPKKESTFEERSYWQSQVNQDICKYGSIPPDVEEKLRLEWPYQEQLLLREHYQKKFKNSTYSRSSVDVLYTFANCSGLDLIFGLNALLRTADLQWNSSNA-QLLLDYCSSKGYNISWELGNEPNSFLK-KADIFINGSQLGEDFIQLHKLLRKSTFKNAKLYGPDVGQPRRKTAKMLKSFLKAGGEVIDSVTWHHYYLNGRTATKEDFLNPDVLDIFISSVQKVFQVVESTRPG-----KKVWLGETSSAYGGGAPLLSDTFAAGFMWLDKLGLSARMGIEVVMRQVFFGAGNYHLVDE-NFDPLPDYWLSLLFKKLVGTKVLMASVQGSKRRKLRVYLHCTNTDNPRYKEGDLTLYAINLHNVTKYLRLPYPFSNKQVDKYLLRPLGPHGLLSKSVQLNGLTLKMVDDQTLPPL-----MEKPLRPGSSLGLPAFSYSFFVIRNAKVAACI 543

The following BLAST results are available for this feature:

BLAST of TCONS_00062070-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00062070-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
HPSE	7.264e-75	33.77	Heparanase OS=Homo sapiens GN=HPSE PE=1 SV=2	[more]

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TCONS_00062070-protein (polypeptide) - C. hemisphaerica