TCONS_00062119-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062119-protein
Unique NameTCONS_00062119-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length144

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062119-protein ID=TCONS_00062119-protein|Name=TCONS_00062119-protein|organism=Clytia hemisphaerica|type=polypeptide|length=144bp
NTEAQDTTLTVTTDSTTDVDVVNIDQSSDYNFSAGKQSEDDETNKTRRGE
IKDNEKKSQICKFYKSGTCKHGLKGKECNYTHPKMCRKFTQHGTRQPRGC
NLGTKCKDFHQKMCLDSLRKGECFSESCRFAHVKGTKRQPPTVK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038942XLOC_038942Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062119TCONS_00062119Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 55..84
e-value: 0.82
score: 17.0
coord: 108..134
e-value: 4.0
score: 11.5
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 55..85
score: 12.436
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 108..135
score: 9.019
IPR000571Zinc finger, CCCH-typeSUPERFAMILY90229CCCH zinc fingercoord: 54..83
NoneNo IPR availableGENE3D4.10.1000.10coord: 107..139
e-value: 0.22
score: 10.8
coord: 47..84
e-value: 1.6E-4
score: 20.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..55

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062119-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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