TCONS_00062128-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062128-protein
Unique NameTCONS_00062128-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length541

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062128-protein ID=TCONS_00062128-protein|Name=TCONS_00062128-protein|organism=Clytia hemisphaerica|type=polypeptide|length=541bp
MMSLSNLRKNRFVLVLLFILSALAYIFIKQKQTENRRLVERIENVKNTIP
PSLYSNIRKLKEKLYTLEFNNNARTQELLSLQRKLQTRMGENVTNEGYLS
LPSIYNYLPHLLGHKDALVPLVHHPVKERKTRTLTFGIPTVRRTKKSYLL
KTLQSLVHGLSAEERDDVILIVYIGEKNSEYVREIYTEIKSQFPAELDDG
FIEVISPPSNFYPDLDNLPPTFNDPIERVRWRAKQNLDYAFLMMYAQSRS
MFYVQMEDDLMATPSYASTIKAFAIQQQSNNWLMIEFSSLGFIGKLFKSS
DLSTLVEFFLMFYKEKPNDWLLDHIFWVKVCHPEKNAKHCNKEKSKLRIK
FKPSLFQHIGKESSLKGKTQKLVDKEFKKQALFHSHLNPKATIKTDLEEY
QKFTAERAYLGHTYMWALSPVKNAVLRMVFEQPEHIERFYFKSGNVEHPG
DKLVNGTVEVLKSATKKSKFLIEDPTDKRGPYKDSDYVIVGKFDFMGVAS
GVISPSLLPISEMRIRVTHDVAKNWVILSEFNLIKQKKTKR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038951XLOC_038951Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062128TCONS_00062128Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006759Glyco_transf_54
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016758transferase activity, transferring hexosyl groups
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0016020 membrane
molecular_function GO:0016758 transferase activity, transferring hexosyl groups
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 28..48
IPR006759Glycosyl transferase family 54PFAMPF04666Glyco_transf_54coord: 98..377
e-value: 5.0E-118
score: 393.1

Blast
BLAST of TCONS_00062128-protein vs. Swiss-Prot (Human)
Match: MGT4B (Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B OS=Homo sapiens GN=MGAT4B PE=1 SV=1)

HSP 1 Score: 461.07 bits (1185), Expect = 9.387e-158
Identity = 227/447 (50.78%), Postives = 305/447 (68.23%), Query Frame = 0
Query:   92 NVTNEGYLSLPSIYNYLPHLLGHKDALVPLVHHPVKERKTRTLTFGIPTVRRTKKSYLLKTLQSLVHGLSAEERDDVILIVYIGEKNSEYVREIYTEIKSQFPAELDDGFIEVISPPSNFYPDLDNLPPTFNDPIERVRWRAKQNLDYAFLMMYAQSRSMFYVQMEDDLMATPSYASTIKAFAIQQQSNNWLMIEFSSLGFIGKLFKSSDLSTLVEFFLMFYKEKPNDWLLDHIFWVKVCHPEKNAKHCNKEKSKLRIKFKPSLFQHIGKESSLKGKTQKLVDKEFKKQALFHSHLNPKATIKTDLEEYQKFTAERAYLGHTYMWALSPVKNAVLRMVFEQPEHIERFYFKSGNVEHPGDKLVNGTVEVLKSATKKS--KFLIEDPTDK-RGPYKDSDYVIVGKFDFMGVASGVISPSLLPISEMRIRVTHDVAKNWVILSEFNLIK 535
            N ++   L LP+++++LPHLL  + +L P V    + R   ++  GIP+VRR   SYL  TL SL+  LS +E++D +++V I E +S+Y   +   IK+ FP E+  G +EVISP  +FYPD   L  +F DP ERVRWR KQNLDY FLMMYAQS+ ++YVQ+EDD++A P+Y ST+K FA+QQ S +W+++EFS LGFIGK+FKS DLS +VEF LMFY++KP DWLLDHI WVKVC+PEK+AKHC+++K+ LRI+FKPSLFQH+G  SSL GK QKL DK+F KQAL   H+NP A + T L+ YQ FT E+AYL   + WA +P     +R  F QP  +ERF+F+SGN+EHP DKL N +VEVL     +S  + L E  T   R P     Y+ +G F + GVA G + P+  P+  +R+ +  D +  WVILSE  L K
Sbjct:  103 NGSHRHVLHLPTVFHHLPHLLAKESSLQPAVR-VGQGRTGVSVVMGIPSVRREVHSYLTDTLHSLISELSPQEKEDSVIVVLIAETDSQYTSAVTENIKALFPTEIHSGLLEVISPSPHFYPDFSRLRESFGDPKERVRWRTKQNLDYCFLMMYAQSKGIYYVQLEDDIVAKPNYLSTMKNFALQQPSEDWMILEFSQLGFIGKMFKSLDLSLIVEFILMFYRDKPIDWLLDHILWVKVCNPEKDAKHCDRQKANLRIRFKPSLFQHVGTHSSLAGKIQKLKDKDFGKQALRKEHVNPPAEVSTSLKTYQHFTLEKAYLREDFFWAFTPAAGDFIRFRFFQPLRLERFFFRSGNIEHPEDKLFNTSVEVLPFDNPQSDKEALQEGRTATLRYPRSPDGYLQIGSF-YKGVAEGEVDPAFGPLEALRLSIQTD-SPVWVILSEIFLKK 546          
The following BLAST results are available for this feature:
BLAST of TCONS_00062128-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MGT4B9.387e-15850.78Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglu... [more]
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