TCONS_00062159-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00062159-protein
Unique Name	TCONS_00062159-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	462

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00062159-protein ID=TCONS_00062159-protein|Name=TCONS_00062159-protein|organism=Clytia hemisphaerica|type=polypeptide|length=462bp
QTWYTPPKVKFLDNLSHDLSSKMAAKLKLELPEMLTFHLSEFLEKAIESY
YKHNSIKGCTNPNSKDFSFQAILDDHSCGKPYNNFTFGGVYQTCQVLGSH
DAVCVANFLQKNPKTNDYRCPTGYEPVMVHKRISPSKCHRVCHRFWFFSW
DCHNECGHAEYSTFWCAASGQVPPNSGYIFGGLYNKLMVNPLTGAANCPP
KFYPQNFGPENMYVCISDDYELGSQYSIPFAGFFSCTTGNPLALKKKTAL
ESQLHSDGPQNWPKACPQTYTQHLAAVDENCEINYCVKANSLSAHGLAIV
RRPPFRSLPKMNRNITIPLTLINDDTGKVWFKSPMNQKWIMATKRTVMEH
LADDISDTATDNIKGRAIYNLKSAMERLTPAEKKEAQISKSTGSNKGDSQ
PVSNGTAVGITIGVIAILLVIVLMVFAKCQRKKKQKGFTEIGAGGSNGPL
DSMQTSHDYQAM

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_038976	XLOC_038976	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00062159	TCONS_00062159	Clytia hemisphaerica	transcript

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.5.100		coord: 393..437 e-value: 6.2E-6 score: 25.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 380..402
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 437..462

Blast

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BLAST of TCONS_00062159-protein vs. Swiss-Prot (Human)
Match: MPEG1 (Macrophage-expressed gene 1 protein OS=Homo sapiens GN=MPEG1 PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 1.094e-74
Identity = 124/321 (38.63%), Postives = 180/321 (56.07%), Query Frame = 0

Query:   30 ELPEMLTFHLSEFLEKAIESYYKHNSIKGCTNPNSKDFSFQAILDDHSCGKPYNNFTFGGVYQTC-QVLGSHDAVCVANFLQKNPKTNDYRCPTGYEPVMVHKRISPS-----KCHRVCHRFWFFSWDCHN--ECGHAEYSTFWCAASGQVPPNSGYIFGGLYNKLMVNPLTGAANCPPKFYPQNFGPENMYVCISDDYELGSQYSIPFAGFFSCTTGNPLALKKKTALESQLHSDGPQNWPKACPQTYTQHLAAVDENCEINYCVKANSLSAHGLAIVRRPPFRSLPKMNRNITIPLTLINDDTGKVWFKSPMNQKWIMA 342
            +LP  L   +S+ +E A++ YY  N+  GCT+ NS +F+FQA  DD SC     NF+FGGVYQ C Q+ G+ D +      QKNP T D+ CP+GY PV +  +I        +CHR C    F    C +  +   AE+  FWC AS QVP NSG +FGGL++   +NP+T A +CP  ++P     EN+ VC+S DYELGS++++PF GFFSCT GNPL       ++  +  D      K CP  ++QH A + + C+++YCVK+   +   L   R PPF   P M++  T  + + N +  + W K     +W + 
Sbjct:  321 DLPGPLVKKVSKTVETAVKRYYTFNTYPGCTDLNSPNFNFQANTDDGSCEGKMTNFSFGGVYQECTQLSGNRDVLLCQKLEQKNPLTGDFSCPSGYSPVHLLSQIHEEGYNHLECHRKCTLLVFCKTVCEDVFQVAKAEFRAFWCVASSQVPENSGLLFGGLFSSKSINPMTNAQSCPAGYFPLRLF-ENLKVCVSQDYELGSRFAVPFGGFFSCTVGNPL-------VDPAISRDLGAPSLKKCPGGFSQHPALISDGCQVSYCVKSGLFTGGSLPPARLPPFTRPPLMSQAATNTVIVTNSENARSWIKDSQTHQWRLG 633

The following BLAST results are available for this feature:

BLAST of TCONS_00062159-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00062159-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MPEG1	1.094e-74	38.63	Macrophage-expressed gene 1 protein OS=Homo sapien...	[more]

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TCONS_00062159-protein (polypeptide) - C. hemisphaerica