TCONS_00062238-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062238-protein
Unique NameTCONS_00062238-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length271

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062238-protein ID=TCONS_00062238-protein|Name=TCONS_00062238-protein|organism=Clytia hemisphaerica|type=polypeptide|length=271bp
MFYEKKEVAKDLIENMVTAKRIETSLNLNIKDGTRNYSKSTDSGSDPDDS
NNNNTIITQQSEQTKNTKPQGQIRAGLRSLYLDKPVRVKFVNHSGKEVQL
YWINFVGECEKAFKILDGKSEVVDTFETHPWIAANARNKKVSHAFTIGNN
LVYYPLMGPNGGKYAVAEIRKAPEKLADLISRPNGTEVLVKFINRTSRPA
YLEMVNPEGDRELKHTLEAGQSWTTCTQEKTFWITTMDQETDEGLLLNYG
WYYSPVKTRMKKERCYITDYI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039011XLOC_039011Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062238TCONS_00062238Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024053VHL_beta_dom
IPR022772VHL_tumour_suppress_b/a_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024053von Hippel-Lindau disease tumour suppressor, beta domainPFAMPF01847VHLcoord: 77..139
e-value: 1.5E-9
score: 37.6
IPR024053von Hippel-Lindau disease tumour suppressor, beta domainGENE3D2.60.40.780coord: 170..268
e-value: 3.8E-12
score: 45.9
coord: 66..169
e-value: 1.4E-16
score: 60.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..70
IPR022772von Hippel-Lindau disease tumour suppressor, beta/alpha domainCDDcd05468pVHLcoord: 78..218
e-value: 3.21668E-19
score: 80.2061
IPR022772von Hippel-Lindau disease tumour suppressor, beta/alpha domainSUPERFAMILY49468VHLcoord: 78..158
IPR022772von Hippel-Lindau disease tumour suppressor, beta/alpha domainSUPERFAMILY49468VHLcoord: 180..260

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062238-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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