TCONS_00062383-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062383-protein
Unique NameTCONS_00062383-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length279

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062383-protein ID=TCONS_00062383-protein|Name=TCONS_00062383-protein|organism=Clytia hemisphaerica|type=polypeptide|length=279bp
MEELQGQSEIKPPSAHKLVKYFPQFTLKVLHMVVKYTLKYLLLILTLLAE
CRRVYYFSTKQFSGGLGYDYEQDMGNLSKLPRHMSFVINEDVTTDYCDIA
NLIVWTIAMGIPYISLYDRHGILKAGESRLGKVIKQKVVKTFGQKKAQGI
DVVLKDSSYRYQNGITYPKKFCVQLLSEEDGKADIISTTKRIAADYADNN
IEEKNINIDHINKSLKAIENIPDPELVVQFGNIYSLNGYLPWQTRLSEIL
NLKTHKKICYSQYYNLLARFSKCDQRFGK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039091XLOC_039091Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062383TCONS_00062383Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001441UPP_synth-like
Vocabulary: Molecular Function
TermDefinition
GO:0016765transferase activity, transferring alkyl or aryl (other than methyl) groups
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001441Decaprenyl diphosphate synthase-likeGENE3D3.40.1180.10coord: 76..279
e-value: 5.6E-27
score: 94.1
IPR001441Decaprenyl diphosphate synthase-likePFAMPF01255Prenyltransfcoord: 168..278
e-value: 1.7E-6
score: 27.6
IPR001441Decaprenyl diphosphate synthase-likeSUPERFAMILY64005Undecaprenyl diphosphate synthasecoord: 76..273

Blast
[Close]
BLAST of TCONS_00062383-protein vs. Swiss-Prot (Human)
Match: NGBR (Dehydrodolichyl diphosphate synthase complex subunit NUS1 OS=Homo sapiens GN=NUS1 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.025e-37
Identity = 77/215 (35.81%), Postives = 119/215 (55.35%), Query Frame = 0 
Query:   70 YEQDMGNLSKLPRHMSFVINE-DVTTDYCDIANLIVWTIAMGIPYISLYDRHGILKAGESRL-GKVIKQKVVKTFGQKKAQGIDVVLKDSSYRYQNGITYPKKFC---VQLLSEEDGKADIISTTKRIAADYADNNIEEKNINIDHINKSLKAIENIPDPELVVQFGNIYSLNGYLPWQTRLSEILNLKTHKKICYSQYYNLLARFSKCDQRFGK 279
            +  D  +L KLP HM  VI E +    + DIA+L+VW +A+GI YIS+YD  GI K   SRL  +++KQ       Q++  G+D       +   N        C   V++LS EDGKADI+   +      A       ++++D +  SL +    PDP+LV++FG + S  G+LPW  RL+EI++L +H  I Y  +++ L +++ C+QR GK
Sbjct:   87 WRADGRSLEKLPVHMGLVITEVEQEPSFSDIASLVVWCMAVGISYISVYDHQGIFKRNNSRLMDEILKQ-------QQELLGLDCSKYSPEFANSNDKDDQVLNCHLAVKVLSPEDGKADIVRAAQDFCQLVAQKQKRPTDLDVDTL-ASLLSSNGCPDPDLVLKFGPVDSTLGFLPWHIRLTEIVSLPSHLNISYEDFFSALRQYAACEQRLGK 293
The following BLAST results are available for this feature:
BLAST of TCONS_00062383-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NGBR1.025e-3735.81Dehydrodolichyl diphosphate synthase complex subun... [more]
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