TCONS_00062437-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062437-protein
Unique NameTCONS_00062437-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1006

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062437-protein ID=TCONS_00062437-protein|Name=TCONS_00062437-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1006bp
MKVLSGACPDSACQKQLFFSEEHTATIECSNCGQRHEIKHLVNVEQVSDP
GHALRGLLHSLVEGHIPSHVKKSSEFVKVKGLSNFGCKLISPLLTTYGLK
GQEVRLLKDMNQGETFDCSHLADRAFLIEEQNLLIPGYGKDTAASYLHDT
LDEIAKVNDNEERLIPIHADGDGHCLPHAISRALVGHELFWHPLLTNLKL
HFMNRLEDYKNLFKDFIEIEEWKDIIDESDPNFVPKYGEMHGLRNIHILG
LANILHRPVILIDSLEGMKSKGDYSGVFLPGLVPIEKCRNKNGKLHKPIV
ISWSSKGRNHFIPLVGIQNKELPRFPAKVLPKVWGLSQNLLTEYIDFEDE
ACIIGGNNSLQEKYLIKLTQAMERQFLLLKGVATSVVTDVYHHLFRSSGL
VGLPPQTITEAALGLTREERLYKCLYCHAVMEEKLPCAHSMLEPGGELFQ
IAIKTHGVLKDKFKYRFPVNDIICQYDKQSNRLKYVHTPESLSCPHCKGA
LRKVKLDGNLEYMNGDQLSKLANNSSCGCGYKHYWDGKEYDNLPIKIPLE
LEWDDETVDDHVYWFQNESDPTLNSNAFELAREKVQEHFPGTFGSERLAE
KIVDTIFEYTTAYYKDTSVEPEAMELDAPTCIPTKIILTGEKSKTLHKEE
LGASRTERIMKKKIEHKAPIQQKRASTSNQMDKGNETNAVSNSTSKLSSV
KDLGDSPTREKVKKSETTINKIRISCQDKGNTMFTLESTTSFDNLVKFIK
KHFDIENEDITMKYGFPPKPLNQNENNPEEPLTMLKAGDRVNVIIVKKVR
KEDPLPSNDTRSNQQKSTQQPTTDKMSQFASQLAQIMGQDLWEWACSQRN
MFQVNGWIYKMAFRDLGLLTDDQHLSLPCFPKKIFVYNKKEDEIYLCLGK
HHIFVQPLTRKEEELAAEQAETKAHELKPSIHHELKQPANQQPETDNSPK
VNNFSGEGYMLANNEKAPENVRTIRQTIDFATFGREDKTIDDEPMVEQKE
NESMDT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039108XLOC_039108Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062437TCONS_00062437Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003323OTU_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 908..928
NoneNo IPR availableCOILSCoilCoilcoord: 996..1006
NoneNo IPR availableGENE3D3.10.20.90coord: 714..765
e-value: 0.028
score: 14.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 666..714
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 985..1006
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 937..957
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 802..825
IPR003323OTU domainPFAMPF02338OTUcoord: 171..279
e-value: 7.3E-6
score: 26.4
IPR003323OTU domainPROSITEPS50802OTUcoord: 164..317
score: 11.253

Blast
BLAST of TCONS_00062437-protein vs. Swiss-Prot (Human)
Match: VCIP1 (Deubiquitinating protein VCIP135 OS=Homo sapiens GN=VCPIP1 PE=1 SV=2)

HSP 1 Score: 812.372 bits (2097), Expect = 0.000e+0
Identity = 433/1013 (42.74%), Postives = 612/1013 (60.41%), Query Frame = 0
Query:    2 KVLSGACPDSACQKQLFFSEEHTATIECSNCGQRHEIKHLVNVEQVSDPGHALRGLLHSLVEGHIPSHVKKSSEFVKVKGLSNFGCKLISPLLTTYGLKGQEVR--LLKDMNQGETFDCSHLADRAFLIEEQNLLIPGYGKDTAAS--YLHDTLDEIAKVNDNEERLIPIHADGDGHCLPHAISRALVGHELFWHPLLTNLKLHFMNRLEDYKNLFKDFIEIEEWKDIIDESDPNFVPKYGEMHGLRNIHILGLANILHRPVILIDSLEGMKSKGDYSGVFLPGLVPIEKCRNKNGKLHKPIVISWSSKGRNHFIPLVGIQNKELPRFPAKVLPKVWGLSQNLLTEYIDF-EDEACIIGGNNSLQEKYLIKLTQAMERQFLLLKGVATSVVTDVYHHLFRSSGLVGLPPQTITEAALGLTREERLYKCLYCHAVMEEKLPCAHSMLEPGGELFQIAIKTHGVLKDKFKYRFPVNDIICQYDKQSNRLKYVHTPESL-SCPHCKG-ALRKVKLDGNLEYMNGDQLSKLANNSSCGCGYKHYWDGKEYDNLPIKIPLELEWDDETVDDHVYWFQNESDPTLNSNAFELAREKVQEHFPGTFGSERLAEKIVDTIFEYTTAYYKD--TSVEPEAMEL---------DAPTCIPTKIILTGEKSKTLHKEELGASRTERIMKKKIEHKAPIQQKRASTSNQMDKGNETNAVSNSTSKLSSVKDLGDSPTREKVKKSETTINKIRISCQDKGNTMFTLESTTSFDNLVKFIKKHFDIENEDITMKYGFPPKPLNQNENNPEEPLTMLKAGDRVNVIIVKKVRKEDPLPSNDTRSNQQKSTQQPTTDKMSQFASQ------------LAQIMGQDLWEWACSQRNMFQVNGWIYKMAFRDLGLLTDDQHLSLPCFPKKIFVYNKKEDEIYLCLGKHHIF-----VQPLTRKEEELAAEQAETKAHELKPSIHHELKQPANQ--QPETDNSPKVNNFSGEGYMLANNEKAPENVRTIRQT 977
            ++LSG+CPD  CQ +LFF    + +IEC+ CGQRHE + L+ VE+V+DP   L  LL + + G +    KK++E VKV GLSN+ CKL+SP+L  YG+  Q  R  LL+DMNQGE FDC+ L DRAFLIE +++   GYGKD + S  YLHDTL++I + N ++E LIP+H DGDGHCL HA+SRALVG ELFWH L  NLK HF   L  Y+ LF DFI+  EW+DII+E DP FVP  G   GLRNIHI GLAN+LHRP+IL+DSL GM+S GDYS  FLPGL+P EKC  K+G L+KPI I+WSS GRNH+IPLVGI+   LP+ P  +LPK WG+ Q+L+ +YI   ED  C+IGG+ SLQ+KYL++L  AME  F+   G+  S+V DV+ + +R +G++G+ P+ +T AA     + RL+KCL C A+ E  +P     L PGG+L+ +A  THG L+    Y FP+N+++C YD   + L   +   +L +C  C G ++RKV+ DG++ Y++GD+ +  +    CGCG+KH+WDGKEYDNLP   P+ LEW    V + VYWFQ ESD +LNSN +++A + V +HFPG FGSE L +K+V TI   T     D  T V  +             ++ + +PTKIILTG+K+KTLHKEEL  S+TER +++ I  +A + QKR +   + ++  +   VS ST +         +PT+     + +   KIRI+  D   +M TL+S+T+F  L + I + F+I      ++YGFPPK L   +   E+    L+ GDR+ + I+K  + E    +    ++  K      T K+S    Q            LA +MG+D+W +A    +MFQ  G  Y +  + +G + D +H + P  P K FVYN  ED + LC+     F     V+ L ++       +A T++ E  PS H  LK  +    + +++    V  F G+G+ L      P      R+T
Sbjct:   43 RILSGSCPDPKCQARLFFPASGSVSIECTECGQRHEQQQLLGVEEVTDPDVVLHNLLRNALLG-VTGAPKKNTELVKVMGLSNYHCKLLSPILARYGMDKQTGRAKLLRDMNQGELFDCALLGDRAFLIEPEHVNTVGYGKDRSGSLLYLHDTLEDIKRANKSQECLIPVHVDGDGHCLVHAVSRALVGRELFWHALRENLKQHFQQHLARYQALFHDFIDAAEWEDIINECDPLFVPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSATFLPGLIPAEKCTGKDGHLNKPICIAWSSSGRNHYIPLVGIKGAALPKLPMNLLPKAWGVPQDLIKKYIKLEEDGGCVIGGDRSLQDKYLLRLVAAMEEVFMDKHGIHPSLVADVHQYFYRRTGVIGVQPEEVTAAAKKAVMDNRLHKCLLCGALSELHVP--PEWLAPGGKLYNLAKSTHGQLRTDKNYSFPLNNLVCSYDSVKDVLVPDYGMSNLTACNWCHGTSVRKVRGDGSIVYLDGDRTNSRSTGGKCGCGFKHFWDGKEYDNLPEAFPITLEWGGRVVRETVYWFQYESDSSLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVHTILHQTAKKNPDDYTPVNIDGAHAQRVGDVQGQESESQLPTKIILTGQKTKTLHKEELNMSKTERTIQQNITEQASVMQKRKTEKLKQEQKGQPRTVSPSTIR-DGPSSAPATPTKAPYSPTTSKEKKIRITTNDGRQSMVTLKSSTTFFELQESIAREFNIPPYLQCIRYGFPPKELMPPQAGMEKEPVPLQHGDRITIEILKS-KAEGGQSAAAHSAHTVKQEDIAVTGKLSSKELQEQAEKEMYSLCLLATLMGEDVWSYAKGLPHMFQQGGVFYSIMKKTMG-MADGKHCTFPHLPGKTFVYNASEDRLELCVDAAGHFPIGPDVEDLVKEAVSQVRAEATTRSRESSPS-HGLLKLGSGGVVKKKSEQLHNVTAFQGKGHSLGTASGNPHLDPRARET 1048          
The following BLAST results are available for this feature:
BLAST of TCONS_00062437-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VCIP10.000e+042.74Deubiquitinating protein VCIP135 OS=Homo sapiens G... [more]
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