TCONS_00062509-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062509-protein
Unique NameTCONS_00062509-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length305

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062509-protein ID=TCONS_00062509-protein|Name=TCONS_00062509-protein|organism=Clytia hemisphaerica|type=polypeptide|length=305bp
LDNIKIQKTSMASVVVYVVFSIMAFFSCATIFVVMSSKFQHSFPLSFQFE
QSKDRRSVETMETQLDENRREDVEAEYLLDDKEGEKEVEEEEEGIDEKCP
FGFDFLKRESEDKSAYSPPRLLLPANRHQNFSGAVFNRDLICLDTLDAKD
GQWVGFYECHGQGRNQMITFSQDGLIVTDNGHLCLAIKNLVSEEVILKKC
DHLDETQIWSVQSRRGWLMPIVKAHYCLTAPDREFDPVKISICKLDSEQQ
RWQHSIQEVLSLWITGSFHQHFFSNRKQKKNRAKVNKVLLHQTPQQSLDG
NILFG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039170XLOC_039170Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062509TCONS_00062509Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000772Ricin_B_lectin
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000772Ricin B, lectin domainSMARTSM00458ricin_3coord: 127..255
e-value: 7.5E-17
score: 72.0
IPR000772Ricin B, lectin domainPFAMPF00652Ricin_B_lectincoord: 133..252
e-value: 5.0E-17
score: 62.2
IPR000772Ricin B, lectin domainPROSITEPS50231RICIN_B_LECTINcoord: 142..255
score: 19.802
IPR000772Ricin B, lectin domainSUPERFAMILY50370Ricin B-like lectinscoord: 141..253
NoneNo IPR availableGENE3D2.80.10.50coord: 203..299
e-value: 1.4E-4
score: 21.3
NoneNo IPR availableGENE3D2.80.10.50coord: 125..202
e-value: 1.0E-9
score: 38.1
NoneNo IPR availableCDDcd00161RICINcoord: 142..252
e-value: 1.25427E-18
score: 78.3162

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062509-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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