TCONS_00062554-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062554-protein
Unique NameTCONS_00062554-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length573

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062554-protein ID=TCONS_00062554-protein|Name=TCONS_00062554-protein|organism=Clytia hemisphaerica|type=polypeptide|length=573bp
MNLATYICNEGLIIILFISWLLTNGFLFFWCYFTMRFDDKFHYMYLMLGE
VIFLARGTGILLNFNCALVLLPMNKFINSWIRSRLFKNTKGSFRRLFDHS
KGIHITLALTICILSVVHTALHIYNFFSFKANFSNAVPDINLQNTRGRTT
LLSFCATIPGFTGLIMLVIALLLSVSSFKAVRRLHHNLFDFLHYLSSVFL
IVLVFHGFGKITKYQTNLDQHPLQCHHLDGKIKLEECKAEPSFNYVQASS
WKWLATSFIIHIIDRLIRLWCRWQECDVISMNKTDSDVIELVFRKKGFKA
KPGQYVRLQCAEISEFEWHAFTLTKCPSKLSDGEQTFSVHIKVVGDWTMR
LANLVKSTKTKETSKPKPNPNDHVIDIKDDVTKENKPIKLVFRIDGSYGS
PHEDAFRFPINISIATGIGITPFLATIRDLKNYERRTTKGTFKLKKFHLI
WVCRSIKEFIWILDEIDDVEQILRANNVEDLLDIRIFVTQEKVEQIQSYL
PSLNVDSEWVSSKVKYGRPFIKSEIETIISPLEKERVGVFYCGSPTLGKK
IYTDVKNLKRGSNILIFNKESFG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039190XLOC_039190Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062554TCONS_00062554Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000778Cyt_b245_heavy_chain
IPR013130Fe3_Rdtase_TM_dom
IPR013112FAD-bd_8
IPR013121Fe_red_NAD-bd_6
IPR017927Fd_Rdtase_FAD-bd
IPR017938Riboflavin_synthase-like_b-brl
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0016020 membrane
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000778Cytochrome b245, heavy chainPRINTSPR00466GP91PHOXcoord: 390..403
score: 28.57
coord: 413..430
score: 33.33
coord: 107..125
score: 32.89
coord: 533..551
score: 35.53
NoneNo IPR availableGENE3D3.40.50.80coord: 397..572
e-value: 1.0E-27
score: 96.5
NoneNo IPR availableGENE3D1.20.1560.10coord: 85..217
e-value: 4.7E-4
score: 18.7
NoneNo IPR availableGENE3D2.40.30.10coord: 265..396
e-value: 2.2E-17
score: 62.6
NoneNo IPR availableCDDcd06186NOX_Duox_like_FAD_NADPcoord: 285..490
e-value: 3.8818E-36
score: 132.814
NoneNo IPR availableSUPERFAMILY52343Ferredoxin reductase-like, C-terminal NADP-linked domaincoord: 414..558
IPR013130Ferric reductase transmembrane component-like domainPFAMPF01794Ferric_reductcoord: 61..204
e-value: 9.1E-14
score: 51.6
IPR013112FAD-binding 8PFAMPF08022FAD_binding_8coord: 279..401
e-value: 5.2E-15
score: 55.4
IPR013121Ferric reductase, NAD binding domainPFAMPF08030NAD_binding_6coord: 414..553
e-value: 3.3E-19
score: 69.4
IPR017927Ferredoxin reductase-type FAD-binding domainPROSITEPS51384FAD_FRcoord: 271..404
score: 12.07
IPR017938Riboflavin synthase-like beta-barrelSUPERFAMILY63380Riboflavin synthase domain-likecoord: 273..359

Blast
[Close]
BLAST of TCONS_00062554-protein vs. Swiss-Prot (Human)
Match: NOX4 (NADPH oxidase 4 OS=Homo sapiens GN=NOX4 PE=1 SV=2)

HSP 1 Score: 290.812 bits (743), Expect = 7.593e-91
Identity = 182/602 (30.23%), Postives = 300/602 (49.83%), Query Frame = 0 
Query:    5 TYICNEGLIIILFISWLLTNGFLFFWCYFTMRFDDKFHYMYLMLGEVIFLARGTGILLNFNCALVLLPMNKFINSWIRSRLFKNTKGSFRRLFDHSKGIHITLALTICILSVVHTALHIYNFFSFKANFSNAVPDINLQNTRGRTTLLSFCATIPGFTGLIMLVIALLLSVSSFKAVRRLHHNLFDFLHYLSSVFLIVLVFHGFGKITKYQTNLDQHPLQCHHLD----GKIKLEE----------------------------CKAEPSFNYVQASSWKWLATSFIIHIIDRLIRLWCRWQECDVISMNKTDSDVIELVFRKKGFKAKPGQYVRLQCAEISEFEWHAFTLTKCPSKLSDGEQTFSVHIKVVGDWTMRLANLVKSTKTKETSKPKPNPNDHVIDIKDDVTKENKPIKLVFRIDGSYGSPHEDAFRFPINISIATGIGITPFLATIRDLKNYERRTTKGTFKLKKFHLIWVCRSIKEFIWILDEIDDVEQILRANNVEDLLDIRIFVTQ-EKVEQIQSYLPSLNVDSEWVSSKVKYGRPFIKSEIETIISPLEKERVGVFYCGSPTLGKKIYTDVKNLKRGSNILIFNKESFG 573
            +++ NEG+  +    WL  N  LF+  +       ++HY++ MLG  + L+R +  +LN NC+L+LLPM + + +++R      ++ + RRL D S+  HIT  +TICI S VH A H+ N  +F  N+S    ++N    R          T+PG TG+ M+V+  L+  +S  A+R  ++++F + H L  VF ++L  H  G + KYQTNLD HP  C  L+      I L E                            C  EP F      +W W++    ++  +RL R     +   +IS+    SDV+E+   K+ FKA+PGQY+ L C  +S  E H FTLT CP   ++ + TF VH+K+VGDWT R  +L+    ++++            +I   +   N P KL   IDG +GSP E++  + +++ +A GIG+TPF + +  L +  +      +KL++ + IWVCR I+ F W  D +  +       N  D ++I+++++Q + +++I      +      ++S++  GRP  K   + I      + VGVF CG  +L K ++              +NKESF 
Sbjct:    7 SWLANEGVKHLCLFIWLSMNVLLFWKTFLLYNQGPEYHYLHQMLGLGLCLSRASASVLNLNCSLILLPMCRTLLAYLRGSQKVPSRRT-RRLLDKSRTFHITCGVTICIFSGVHVAAHLVNALNFSVNYSEDFVELNAARYRDEDPRKLLFTTVPGLTGVCMVVVLFLMITASTYAIRVSNYDIFWYTHNLFFVFYMLLTLHVSGGLLKYQTNLDTHPPGCISLNRTSSQNISLPEYFSEHFHEPFPEGFSKPAEFTQHKFVKICMEEPRFQANFPQTWLWISGPLCLYCAERLYRYIRSNKPVTIISVMSHPSDVMEIRMVKENFKARPGQYITLHCPSVSALENHPFTLTMCP---TETKATFGVHLKIVGDWTERFRDLLLPPSSQDS------------EILPFIQSRNYP-KLY--IDGPFGSPFEESLNYEVSLCVAGGIGVTPFASILNTLLDDWK-----PYKLRRLYFIWVCRDIQSFRWFADLLCMLHNKFWQENRPDYVNIQLYLSQTDGIQKI------IGEKYHALNSRLFIGRPRWKLLFDEIAKYNRGKTVGVFCCGPNSLSKTLHKLSNQNNSYGTRFEYNKESFS 578
The following BLAST results are available for this feature:
BLAST of TCONS_00062554-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NOX47.593e-9130.23NADPH oxidase 4 OS=Homo sapiens GN=NOX4 PE=1 SV=2[more]
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