TCONS_00062732-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062732-protein
Unique NameTCONS_00062732-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length597

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062732-protein ID=TCONS_00062732-protein|Name=TCONS_00062732-protein|organism=Clytia hemisphaerica|type=polypeptide|length=597bp
MHENRILKNKEARFNEEYNTLEEENTSLQKNLSRAKQTMVEFEGLKVENQ
SLLDEIDSLRLQLQMASSARDQFEKQLHESLESLKEQREKITHNQREINE
LKQQAIAQKCGMVYGKGDFNGRIDMDGGGEHPLVRQIEQEYKTTHPSPSP
AVVDDILKELQGGEVRDLEEQLRVVQEEKEHLEKELTRQASNADIVADAT
SLLRRGSSGNVSEEGDEYTLNNQLQELSDVRSRESAYQLEIKRLCEETDE
LKELLVDVENEKNALEESAKGESKQLSDDLLQTKSKLRESEGKVKDLKER
VSVLKETASEGDGLFKNLYDGLVEILNQLLSVQCKVVIINGEEQTDSKIA
KPGEMSSPSDCLKLTTQVKRQVQTLNVAVEKTMNKQKTSSAKEGDTNGEQ
NNDIIAENALLKEQILKLKSLVTTKREQISTLRTVLKANKSTYEVALANL
KSRYENDKQIQSEANGQLKKQIKSLKSECQTFASLRSMFASRCEEYLKEL
HEKQKAILAAEEEKRTLNQLLKQAIHQKVALTQRVEEFEIARERLRQFTK
KNAKSVPSGASATGATGPANGAGPKGPNKGQRPGNGPRGPPRPVTRL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039305XLOC_039305Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062732TCONS_00062732Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018477Bicaudal-D_microtubule-assoc
IPR013321Arc_rbn_hlx_hlx
Vocabulary: Cellular Component
TermDefinition
GO:0005794Golgi apparatus
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006810 transport
cellular_component GO:0005794 Golgi apparatus
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 493..541
NoneNo IPR availableCOILSCoilCoilcoord: 158..192
NoneNo IPR availableCOILSCoilCoilcoord: 4..38
NoneNo IPR availableCOILSCoilCoilcoord: 241..275
NoneNo IPR availableCOILSCoilCoilcoord: 42..104
NoneNo IPR availableCOILSCoilCoilcoord: 280..307
NoneNo IPR availableCOILSCoilCoilcoord: 458..478
NoneNo IPR availableGENE3D1.20.5.170coord: 5..106
e-value: 5.5E-4
score: 19.5
NoneNo IPR availableGENE3D1.20.1170.10coord: 127..311
e-value: 1.1E-7
score: 30.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 550..597
IPR018477Bicaudal-D protein, microtubule-associatedPFAMPF09730BicDcoord: 356..539
e-value: 4.5E-58
score: 197.2
coord: 5..191
e-value: 4.7E-19
score: 68.2
IPR013321Arc-type ribbon-helix-helixGENE3D1.10.1220.10coord: 497..558
e-value: 5.8E-4
score: 19.8

Blast
[Close]
BLAST of TCONS_00062732-protein vs. Swiss-Prot (Human)
Match: BICD1 (Protein bicaudal D homolog 1 OS=Homo sapiens GN=BICD1 PE=1 SV=3)

HSP 1 Score: 207.994 bits (528), Expect = 2.085e-57
Identity = 213/698 (30.52%), Postives = 332/698 (47.56%), Query Frame = 0 
Query:    3 ENRILKNKEARFNEEYNTLEEENTSLQKNLSRAKQTMVEFEGLKVENQSLLDEIDSLRLQLQMASSARDQFEKQLHESLESLKEQREKITHNQREINE---LKQQAIAQKC-GMVYGK--GDFNGRIDMDGGGEHPLVRQIEQEYKTT--HPSPSPAVVDDILKELQGGEVRDLEEQLRVVQEEK--------------EHLEKELTRQASNADIVADATSLLR------------RGSSGNVS-EEGDEYTLN-NQLQELSDVRSRESAYQLEIKRLCEETDELKELLVDV-ENEKNALEESAKGESK-QLSDDLLQTKSK-LRESEGKVKDLKERVSVLKETASEGDGLFKNLYDGLVEILNQLLSVQCKVVIINGEEQT--------DSKIAKPGEMSSPSDCLKL----------TTQVKRQVQTLNVAVEKTMNKQKTSSAK------------------EGDTNGEQNNDIIAENALLKEQI--------------------------------------LKLKSLVTTKREQISTLRTVLKANKSTYEVALANLKSRYENDKQIQSEANGQLKKQIKSLKSECQTFASLRSMFASRCEEYLKELHEKQKAILAAEEEKRTLNQLLKQAIHQKVALTQRVEEFEIARERLRQFTKKNAKS---VPSGASATGATGPA------NGAGPKGPN 578
            E R  K +EAR  ++Y  LEEEN +LQK +S  KQ  VE+EGLK E +   +E   L  QL+ A   ++  E QL E+LE+LK +RE+  + ++E+++   L    I+    G+ + +   + N    M+G    PLV+ +  +Y+T       S   V D+  EL   E++ L++QL  V+ EK              EH +  LT Q      + +  + +R             G  G  S EE  +Y ++ N L+ L      E  Y++ +  + +   E+K L     ++ +N  +E AK ESK Q+ D+ + +  K  +ES  K+  +++ +  +   A+E         D LV    +L  +   V + N E            S++ + G +  P D   L          ++ V+ +  +  VA E T   ++ S  K                    D   E  N I   NA++++QI                                      LKLKSL++TKREQI+TLR VLKANK T EVALANLK++YEN+K + +E   +L+ ++K+LK +  TF+SLR+MFA+RC+EY+ +L E Q+ + AAE+EK+TLN LL+ AI QK+ALTQR+E+ E   E+ R+   K  KS    P  +     T P       +  GP+ PN
Sbjct:  157 EIREYKFREARLLQDYTELEEENITLQKLVSTLKQNQVEYEGLKHEIKRFEEETVLLNSQLEDAIRLKEIAEHQLEEALETLKNEREQKNNLRKELSQYISLNDNHISISVDGLKFAEDGSEPNNDDKMNGHIHGPLVK-LNGDYRTPTLRKGESLNPVSDLFSELNISEIQKLKQQLMQVEREKAILLANLQESQTQLEHTKGALTEQHERVHRLTEHVNAMRGLQSSKELKAELDGEKGRDSGEEAHDYEVDINGLEIL------ECKYRVAVTEVIDLKAEIKALKEKYNKSVENYTDEKAKYESKIQMYDEQVTSLEKTTKESGEKMAHMEKELQKMTSIANENHSTLNTAQDELVTFSEELAQLYHHVCLCNNETPNRVMLDYYRQSRVTRSGSLKGPDDPRGLLSPRLARRGVSSPVETRTSSEPVAKESTEASKEPSPTKTPTISPVITAPPSSPVLDTSDIRKEPMN-IYNLNAIIRDQIKHLQKAVDRSLQLSRQRAAARELAPMIDKDKEALMEEILKLKSLLSTKREQIATLRAVLKANKQTAEVALANLKNKYENEKAMVTETMTKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNTLLRMAIQQKLALTQRLEDLEFDHEQSRRSKGKLGKSKIGSPKVSGEASVTVPTIDTYLLHSQGPQTPN 846
The following BLAST results are available for this feature:
BLAST of TCONS_00062732-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BICD12.085e-5730.52Protein bicaudal D homolog 1 OS=Homo sapiens GN=BI... [more]
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