TCONS_00062915-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062915-protein
Unique NameTCONS_00062915-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length251

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062915-protein ID=TCONS_00062915-protein|Name=TCONS_00062915-protein|organism=Clytia hemisphaerica|type=polypeptide|length=251bp
MNVLLLRQEEEESDKYHLRFQDSLIGNVTSVPVLGFEYCNLDKIVDFVDT
IDQYSGLIFTSRRAVTAFEKVVEPSDIEKIRQMADFTLYVVGRTTENCLK
QLGLESVGSETGNAKELSDLVIKQQENTEKPLMFLCGNLARETIPKRLTE
KEIPNESISCYKTIPDTQFETNLKNYLIGFTPDVVTFYSPSGAEFHMSSL
IKLISGLGESVKVACIGEYTAQAVRKLGINVSAVAEKPNPDSLFEAIKSI
S
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039405XLOC_039405Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062915TCONS_00062915Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0037544pyrrol_synth_uPrphyn_synth
Vocabulary: Molecular Function
TermDefinition
GO:0004852uroporphyrinogen-III synthase activity
Vocabulary: Biological Process
TermDefinition
GO:0033014tetrapyrrole biosynthetic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0033014 tetrapyrrole biosynthetic process
molecular_function GO:0004852 uroporphyrinogen-III synthase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.10090coord: 34..156
e-value: 1.3E-23
score: 83.0
NoneNo IPR availableGENE3D3.40.50.10090coord: 157..251
e-value: 2.1E-19
score: 68.8
IPR003754Tetrapyrrole biosynthesis, uroporphyrinogen III synthasePFAMPF02602HEM4coord: 26..245
e-value: 1.3E-43
score: 148.9
IPR003754Tetrapyrrole biosynthesis, uroporphyrinogen III synthaseCDDcd06578HemDcoord: 3..247
e-value: 2.2997E-49
score: 163.247
IPR003754Tetrapyrrole biosynthesis, uroporphyrinogen III synthaseSUPERFAMILY69618HemD-likecoord: 1..249

Blast
[Close]
BLAST of TCONS_00062915-protein vs. Swiss-Prot (Human)
Match: HEM4 (Uroporphyrinogen-III synthase OS=Homo sapiens GN=UROS PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 3.070e-39
Identity = 89/259 (34.36%), Postives = 142/259 (54.83%), Query Frame = 0 
Query:    1 MNVLLLRQEEEE---SDKYHLRFQDSLIG-NVTSVPVLGFEYCNLDKIVDFVDTIDQYSGLIFTSRRAVTAFEKVVEPSDIEKIRQMA------DFTLYVVGRTTENCLKQLGLESVGSETGNAKELSDLVIKQQENTEKPLMFLCGNLARETIPKRLTEKEIPNESISCYKTIPDTQFETNLKNYLI-GFTPDVVTFYSPSGAEFHMSSLIKLISGLGESVKVACIGEYTAQAVRKLGINVSAVAEKPNPDSLFEAIK 248
            M VLLL+  +E+    D Y       L G   T +PVL FE+ +L    + +   + Y GLIFTS RAV A E  +E ++  ++ + +        ++YVVG  T + + ++GL++ G   GNA++L++ +   +E++  PL+F CGNL RE +PK L +K I  ESI+ Y+T+     + NL +Y      P  +TF+SPSG  + +  + +L     + +K A IG  TA+A+   G+ VS  AE P P +L   I+
Sbjct:    1 MKVLLLKDAKEDDCGQDPYIREL--GLYGLEATLIPVLSFEFLSLPSFSEKLSHPEDYGGLIFTSPRAVEAAELCLEQNNKTEVWERSLKEKWNAKSVYVVGNATASLVSKIGLDTEGETCGNAEKLAEYIC-SRESSALPLLFPCGNLKREILPKALKDKGIAMESITVYQTVAHPGIQGNLNSYYSQQGVPASITFFSPSGLTYSLKHIQELSGDNIDQIKFAAIGPTTARALAAQGLPVSCTAESPTPQALATGIR 256
The following BLAST results are available for this feature:
BLAST of TCONS_00062915-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HEM43.070e-3934.36Uroporphyrinogen-III synthase OS=Homo sapiens GN=U... [more]
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