TCONS_00062985-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00062985-protein
Unique NameTCONS_00062985-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length164

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00062985-protein ID=TCONS_00062985-protein|Name=TCONS_00062985-protein|organism=Clytia hemisphaerica|type=polypeptide|length=164bp
MDYGRIAKIAAGVAGLSFLGYCIYFDRKRRSDPLFKQKLKERRERARRNA
SNSKKKLNIPDLKDQNAIQQFFLASVEEGERYLAMQDYENCVNSLTQAIA
VCGQPQQLLQVFRTTLPPQVFQMLLANLAALGENQPAGASGMNVASGMSV
GAPMGVSSFYNYFN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039446XLOC_039446Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00062985TCONS_00062985Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022422MAS20_rcpt_metazoan
IPR002056MAS20
IPR023392Tom20_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005742mitochondrial outer membrane translocase complex
Vocabulary: Biological Process
TermDefinition
GO:0006605protein targeting
GO:0006886intracellular protein transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006605 protein targeting
cellular_component GO:0005742 mitochondrial outer membrane translocase complex
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 36..56
NoneNo IPR availableGENE3D1.20.960.10coord: 55..145
e-value: 1.0E-26
score: 91.9
IPR022422Protein import receptor MAS20, metazoanPRINTSPR01989EUOM20RECPTRcoord: 121..138
score: 31.48
coord: 94..103
score: 75.0
coord: 4..21
score: 55.56
coord: 60..73
score: 67.86
coord: 105..117
score: 76.28
coord: 75..89
score: 42.22
IPR002056Protein import receptor MAS20PRINTSPR00351OM20RECEPTORcoord: 20..41
score: 59.18
coord: 60..82
score: 33.13
coord: 97..117
score: 45.14
IPR002056Protein import receptor MAS20PFAMPF02064MAS20coord: 11..125
e-value: 8.6E-39
score: 132.5
IPR002056Protein import receptor MAS20PIRSFPIRSF037707TOM20coord: 1..152
e-value: 6.6E-33
score: 111.1
IPR023392Mitochondrial outer membrane translocase complex, subunit Tom20 domainSUPERFAMILY47157Mitochondrial import receptor subunit Tom20coord: 57..133

Blast
[Close]
BLAST of TCONS_00062985-protein vs. Swiss-Prot (Human)
Match: TOM20 (Mitochondrial import receptor subunit TOM20 homolog OS=Homo sapiens GN=TOMM20 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.117e-37
Identity = 77/133 (57.89%), Postives = 94/133 (70.68%), Query Frame = 0 
Query:    4 GRIAKIAAGVAGLSFLGYCIYFDRKRRSDPLFKQKLKERRER---ARRNASNSKKKLNIPDLKDQNAIQQFFLASVEEGERYLAMQDYENCVNSLTQAIAVCGQPQQLLQVFRTTLPPQVFQMLLANLAALGE 133
            GR + IAAGV G  F+GYCIYFDRKRRSDP FK +L+ERR++   A+  A  SK    +PDLKD  A+Q+FFL  ++ GE  LA  +YE  V+ LT AIAVCGQPQQLLQV + TLPP VFQMLL  L  + +
Sbjct:    3 GRNSAIAAGVCGALFIGYCIYFDRKRRSDPNFKNRLRERRKKQKLAKERAGLSK----LPDLKDAEAVQKFFLEEIQLGEELLAQGEYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQMLLTKLPTISQ 131
The following BLAST results are available for this feature:
BLAST of TCONS_00062985-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TOM201.117e-3757.89Mitochondrial import receptor subunit TOM20 homolo... [more]
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