TCONS_00063021-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063021-protein
Unique NameTCONS_00063021-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length357

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063021-protein ID=TCONS_00063021-protein|Name=TCONS_00063021-protein|organism=Clytia hemisphaerica|type=polypeptide|length=357bp
MQVWEGCGNGSISFDSSDIGSPYISHIVENNAIIESCGEQAKECKSVEMM
YQTRLINYTAPDSSASEKLVTLEASNGEKIATKLLVAADGFNSFIRTNSG
IKTIDYDYGQSAVVATIKVKTPLPNKTAWQRYLTNGPVALLPLSDEWSSL
VWSTSKDKAKELMQLSDSEFIENLNEAFTKPNNSLIPVNALSDFMKNVMS
TIQPGKYASNVSHKVPMPIDILPQSRGMFPLGMKHSTYYVKSRIALIGDS
AHRIHPMAGQGVNLGFGDVKSLVENIDNSCRLGRDFGALENLLPYETERQ
RHVLSIIGAINGLNMLFSTDAFPVVFARTLGLTMTDSVSNIKVNIFLYLC
KSKAKDK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039479XLOC_039479Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063021TCONS_00063021Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023753FAD/NAD-binding_dom
IPR010971UbiH/COQ6
IPR002938FAD-bd
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006744ubiquinone biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0016709oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
GO:0050660flavin adenine dinucleotide binding
GO:0071949FAD binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006744 ubiquinone biosynthetic process
molecular_function GO:0071949 FAD binding
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00420RNGMNOXGNASEcoord: 241..256
score: 42.29
coord: 256..272
score: 40.0
coord: 81..96
score: 37.08
IPR023753FAD/NAD(P)-binding domainGENE3D3.50.50.60coord: 10..324
e-value: 6.2E-20
score: 71.3
IPR023753FAD/NAD(P)-binding domainSUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 1..102
coord: 228..338
IPR010971Ubiquinone biosynthesis hydroxylase UbiH/COQ6TIGRFAMTIGR01988TIGR01988coord: 1..347
e-value: 5.0E-93
score: 310.0
IPR002938FAD-binding domainPFAMPF01494FAD_binding_3coord: 40..182
e-value: 7.7E-7
score: 28.6
coord: 229..302
e-value: 1.6E-7
score: 30.8

Blast
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BLAST of TCONS_00063021-protein vs. Swiss-Prot (Human)
Match: COQ6 (Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial OS=Homo sapiens GN=COQ6 PE=1 SV=2)

HSP 1 Score: 272.322 bits (695), Expect = 7.141e-88
Identity = 139/355 (39.15%), Postives = 215/355 (60.56%), Query Frame = 0 
Query:    1 MQVWEGCGNGSISFDSSDIGSPYISHIVENNAIIESCGEQAKECKS-VEMMYQTRLINYTAP---DSSASEKLVTLEASNGEKIATKLLVAADGFNSFIRTNSGIKTIDYDYGQSAVVATIKVKTPLPNKTAWQRYLTNGPVALLPLSDEWSSLVWSTSKDKAKELMQLSDSEFIENLNEAFTKPNNSLIPVNALSDFMKNVMSTIQPGKYASNVSHKVPMPIDILPQSRGMFPLGMKHSTYYVKSRIALIGDSAHRIHPMAGQGVNLGFGDVKSLVENIDNSCRLGRDFGALENLLPYETERQRHVLSIIGAINGLNMLFSTDAFPVVFARTLGLTMTDSVSNIKVNIFLYLCK 351
            MQVW+ C    I FD  ++    + +IVEN+ I+ +  +Q +     V ++Y+++ I YT P     + S   V +   +G    TKLL+ ADG NS +R   GI+ + ++Y QSAVVAT+ +     N  AWQR+L +GP+ALLPLSD  SSLVWSTS + A EL+ + + +F++ +N AF    +    ++     ++  +S ++P K ++      P    +  +SR +FPLG+ H+  YV+ R+ALIGD+AHR+HP+AGQGVN+GFGD+ SL  ++  +   G+D G++ +L  YETERQRH  +++ A + L  L+ST A P+V  RT GL  T++VS +K  I  +  K
Sbjct:  118 MQVWDACSEALIMFDKDNLDD--MGYIVENDVIMHALTKQLEAVSDRVTVLYRSKAIRYTWPCPFPMADSSPWVHITLGDGSTFQTKLLIGADGHNSGVRQAVGIQNVSWNYDQSAVVATLHLSEATENNVAWQRFLPSGPIALLPLSDTLSSLVWSTSHEHAAELVSMDEEKFVDAVNSAFWSDADHTDFIDTAGAMLQYAVSLLKPTKVSAR--QLPPSVARVDAKSRVLFPLGLGHAAEYVRPRVALIGDAAHRVHPLAGQGVNMGFGDISSLAHHLSTAAFNGKDLGSVSHLTGYETERQRHNTALLAATDLLKRLYSTSASPLVLLRTWGLQATNAVSPLKEQIMAFASK 468
The following BLAST results are available for this feature:
BLAST of TCONS_00063021-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
COQ67.141e-8839.15Ubiquinone biosynthesis monooxygenase COQ6, mitoch... [more]
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