TCONS_00063184-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063184-protein
Unique NameTCONS_00063184-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length244

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063184-protein ID=TCONS_00063184-protein|Name=TCONS_00063184-protein|organism=Clytia hemisphaerica|type=polypeptide|length=244bp
IDPSLSKTILKEDEYRYINDLIILYQMEHRPKLRIALLHVFGCFCQLGAD
FVSTLLCSVLPTELAQDLMQDQSDMTKFLTTSLMLTMIFSTGEPVPYHHY
VQFNDEFVEFVLNTIEEPPDNDIDDQVSDTLIGMLLSFNQHFKAPRSSTL
IQVLRNRTVFRTLTEKILLLLNRETDPCAMFDFIDPCPDSVLKFLIDVFS
AKETSEMFFTNDLYVLFDIILRQLVNREEKDKVSETKMWSFLIP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039591XLOC_039591Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063184TCONS_00063184Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018556DUF2013
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018556Domain of unknown function DUF2013PFAMPF09431DUF2013coord: 124..233
e-value: 1.0E-24
score: 87.1

Blast
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BLAST of TCONS_00063184-protein vs. Swiss-Prot (Human)
Match: SPN90 (NCK-interacting protein with SH3 domain OS=Homo sapiens GN=NCKIPSD PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 8.618e-47
Identity = 91/232 (39.22%), Postives = 131/232 (56.47%), Query Frame = 0 
Query:    2 DPSLSKTILKEDEYRYINDLIILYQMEHRPKLRIALLHVFGCFCQLGADFVSTLLCSVLPTELAQDLMQDQSDMTKFLTTSLMLTMIFSTGEPVPYHHYVQFNDEFVEFVLNTIEEPPDNDIDDQVSDTLIGMLLSFNQHFKAPRSSTLIQVLRNRTVFRTLTEKILLLLNRETDPCAMFDFIDPCPDSVLKFLIDVFSAKETSEMFFTNDLYVLFDIILRQLVNREEKDKV 233
            DP + K + K +E+  +  L+  YQMEHR  LR+ LL  FG  C L A  +STL+ SVLP ELA+D+  D  D  K   ++L+L M+FS GE VPY HY      F +F+LN +E+    D  +Q+ D  + +LL+ N H  A   + ++  L      +  +EK+LLLLNR  DP  +F      P SVLKFL DVF +  T+ +F+  D+  L DI +R + +    DK+
Sbjct:  425 DPEVCKKMCKRNEFESVLALVAYYQMEHRASLRLLLLKCFGAMCSLDAAIISTLVSSVLPVELARDMQTDTQDHQKLCYSALILAMVFSMGEAVPYAHYEHLGTPFAQFLLNIVEDGLPLDTTEQLPDLCVNLLLALNLHLPAADQNVIMAALSKHANVKIFSEKLLLLLNRGDDPVRIFKHEPQPPHSVLKFLQDVFGSPATAAIFYHTDMMALIDITVRHIADLSPGDKL 656
The following BLAST results are available for this feature:
BLAST of TCONS_00063184-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SPN908.618e-4739.22NCK-interacting protein with SH3 domain OS=Homo sa... [more]
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