TCONS_00063253-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063253-protein
Unique NameTCONS_00063253-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length380

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063253-protein ID=TCONS_00063253-protein|Name=TCONS_00063253-protein|organism=Clytia hemisphaerica|type=polypeptide|length=380bp
MDATSMNFHYNHCLLVVAVSLICFYNGVHLQSITDYEEKGCIGLPDGVYP
IRNLSEYIVCENNIGNISSCRPNEIYSTNHSSCTPLKNITEESFCDNRPT
GDWMYIWDCHKFFHCYFNWYNVQICENNTVYNALHDVCTSESENTCMAYN
LTKSSGNHGTESPSTTMMPITTISPGGSNTTNSTNTTSTPSTFITTPSPI
TTQLPPTTSYPTFSPGESNTTNSTNTTLAPSTLTTTALPITTSLPLTTPY
PTENSTSSSNATTDTKDLIFPNDLQQKLANNESIILIDVRMPWELKLEGK
IGASINIPLPKISDAFQLEKEQFESRYGIKKPKKDDCSLIFHCKSGVRSM
QAVTIVKSLGYTCPKSLDGGFEAWKKIYQK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039638XLOC_039638Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063253TCONS_00063253Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002557Chitin-bd_dom
IPR001763Rhodanese-like_dom
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0006030chitin metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006030 chitin metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0008061 chitin binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002557Chitin binding domainSMARTSM00494chi_10coord: 39..90
e-value: 2.7
score: 15.0
coord: 93..148
e-value: 1.8
score: 17.1
IPR002557Chitin binding domainPFAMPF01607CBM_14coord: 41..88
e-value: 5.2E-5
score: 23.2
IPR002557Chitin binding domainGENE3D2.170.140.10coord: 90..158
e-value: 1.1E-4
score: 21.6
coord: 30..89
e-value: 3.1E-4
score: 20.1
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 92..148
score: 9.981
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 38..83
score: 6.518
IPR002557Chitin binding domainSUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 92..149
IPR002557Chitin binding domainSUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 36..87
IPR001763Rhodanese-like domainSMARTSM00450rhod_4coord: 269..380
e-value: 1.1E-15
score: 68.1
IPR001763Rhodanese-like domainPFAMPF00581Rhodanesecoord: 271..376
e-value: 8.5E-13
score: 48.7
IPR001763Rhodanese-like domainGENE3D3.40.250.10coord: 263..378
e-value: 3.7E-21
score: 74.8
IPR001763Rhodanese-like domainPROSITEPS50206RHODANESE_3coord: 280..376
score: 15.832
IPR001763Rhodanese-like domainSUPERFAMILY52821Rhodanese/Cell cycle control phosphatasecoord: 260..378
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..264
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..229

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063253-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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