TCONS_00063318-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063318-protein
Unique NameTCONS_00063318-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length341

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063318-protein ID=TCONS_00063318-protein|Name=TCONS_00063318-protein|organism=Clytia hemisphaerica|type=polypeptide|length=341bp
MYRTLNKISSKSSYLYLITIAILSIWLISCKFTIYKLNQQSGNVLSVKRR
GTSQFIKAGNKINCYMFILIMSSPKGALRRTSMRETWIKTNDVNKLKIER
RFIIGTKGLTPNILKELSSEQAKHSDLLLLDDFADSYSKLTEKLLRTILW
IENNVDAKFVMKVDDDSFVRLDKLIPSLSAKEHIGRIYWGFFKGNARIKR
AGAWKETKWFLSDHYLPYAVGGGYVITFDLVTFISSNANYLSLYNSEDVS
MGVWLASIKLNRFHDVRFDTWYKSMGCSNLHIVSHKQQPEDMYAKHNQLT
NNGKLCKVEKELMLTWDYNWNEFPSNCCSKRVKISSIKTFL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039669XLOC_039669Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063318TCONS_00063318Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002659Glyco_trans_31
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0008378galactosyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006486protein glycosylation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006486 protein glycosylation
cellular_component GO:0016020 membrane
molecular_function GO:0008378 galactosyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002659Glycosyl transferase, family 31PFAMPF01762Galactosyl_Tcoord: 79..264
e-value: 3.0E-33
score: 115.2
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..30
score: 6.0

Blast
[Close]
BLAST of TCONS_00063318-protein vs. Swiss-Prot (Human)
Match: B3GT6 (Beta-1,3-galactosyltransferase 6 OS=Homo sapiens GN=B3GALT6 PE=1 SV=2)

HSP 1 Score: 260.381 bits (664), Expect = 2.723e-85
Identity = 124/266 (46.62%), Postives = 170/266 (63.91%), Query Frame = 0 
Query:   72 SSPKGALRRTSMRETWIKTNDVNKLKIERRFIIGTKGLTPNILKELSSEQAKHSDLLLLDDFADSYSKLTEKLLRTILWIENNVDAKFVMKVDDDSFVRLDKLIPSLSAKEHIGR--IYWGFFKGNARIKRAGAWKETKWFLSDHYLPYAVGGGYVITFDLVTFISSNANYLSLYNSEDVSMGVWLASIKLNRFHDVRFDTWYKSMGCSNLHIVSHKQQPEDMYAKHNQLTNNGKLCKVEKELMLTWDYNWNEFPSNCCSKRVKIS 335
            S+P+ A RR+ +R TW+         +  RF +GT GL     + L  EQA+H DLLLL    D+Y  LT K+L  + W++ +V  +FV+K DDDSF RLD L+  L A+E   R  +YWGFF G  R+K  G W+E  W L D+YLPYA+GGGYV++ DLV ++  + +YL  ++SEDVS+G WLA + + R HD RFDT Y+S GCSN ++V+HKQ  EDM  KH  L   G+LCK E +L L++ Y+W+  PS CC +R  I 
Sbjct:   65 SAPRAAERRSVIRSTWLARRGAPG-DVWARFAVGTAGLGAEERRALEREQARHGDLLLLPALRDAYENLTAKVLAMLAWLDEHVAFEFVLKADDDSFARLDALLAELRAREPARRRRLYWGFFSGRGRVKPGGRWREAAWQLCDYYLPYALGGGYVLSADLVHYLRLSRDYLRAWHSEDVSLGAWLAPVDVQREHDPRFDTEYRSRGCSNQYLVTHKQSLEDMLEKHATLAREGRLCKREVQLRLSYVYDWSAPPSQCCQRREGIP 329
The following BLAST results are available for this feature:
BLAST of TCONS_00063318-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
B3GT62.723e-8546.62Beta-1,3-galactosyltransferase 6 OS=Homo sapiens G... [more]
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