TCONS_00063368-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063368-protein
Unique NameTCONS_00063368-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length425

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063368-protein ID=TCONS_00063368-protein|Name=TCONS_00063368-protein|organism=Clytia hemisphaerica|type=polypeptide|length=425bp
RRYEKILNSKKMDFDLLPNELLRTVISYLDIKSAKQMSLVSKRMYSFALQ
RIWLKPRYSWPAKEIDFLEKISQFPISELHTGDFDCTWFELITLVPRLKL
LHVTAPKQLSQYRIKTPKMSRLRLLKVPTIVYTKALELSEQEHFSQLSEI
IELIDVKELIIDRSCPVYDDGKSSRRFSFPNFEMLVGKVRISEIWMDCLE
INDQNAEEFIRLLATIKNCRLIFPHPSSTAYHKYTVRDLELMVKFDLKIT
TINSRSLRTEGKVSKLLEFAKVMKKMKYLEEFKCDDFDQDTGVYAPMELL
TDLPIKFLISWNFEFHEGGIEDIAKTLSRMKHLTEFYLQQNYHVFLLSPE
ELALFKDVPITCLELCVLDLKRDNIDKFQNVMKEMRIKFIEWGDYKGPED
FDFEIKVKPFGLGGIYKTIXXPLVL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039707XLOC_039707Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063368TCONS_00063368Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
IPR032675L_dom-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 368..388
NoneNo IPR availableGENE3D1.20.1280.50coord: 12..141
e-value: 2.0E-5
score: 24.4
IPR001810F-box domainPFAMPF12937F-box-likecoord: 16..54
e-value: 1.7E-5
score: 24.5
IPR001810F-box domainPROSITEPS50181FBOXcoord: 11..56
score: 10.61
IPR001810F-box domainSUPERFAMILY81383F-box domaincoord: 11..60
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 142..388
e-value: 7.4E-4
score: 17.3

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063368-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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