TCONS_00063441-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063441-protein
Unique NameTCONS_00063441-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length277

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063441-protein ID=TCONS_00063441-protein|Name=TCONS_00063441-protein|organism=Clytia hemisphaerica|type=polypeptide|length=277bp
MKLLQILILVSVVNADQFFNNFTICGKPIKKRTMESSNYVSPGYFPWQAA
VKKTVISNFNGLPDCGATLISNEWLVSAAHCNITVGDHVVLGANYIGLSV
EESRQYFRVKFVRPHPSYSKVTNDYDIALVQLDKPATYTDYVRPACIINS
GTKLAAATKSEVSGWGLLKCGGPENLQKGEISISSNDVCNQIYGNKEVTP
RMLCAKHPAGGREGCLGDGGGPLVVDVKQNQQFYLAGVVSWGTKCRHGFP
EVFANVSTLREWLQEELKSKKGYFLSG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039763XLOC_039763Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063441TCONS_00063441Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR001254Trypsin_dom
IPR018114TRYPSIN_HIS
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001314Peptidase S1A, chymotrypsin familyPRINTSPR00722CHYMOTRYPSINcoord: 212..224
score: 54.74
coord: 66..81
score: 48.56
coord: 122..136
score: 38.68
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 32..263
e-value: 2.1E-59
score: 213.3
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 41..263
e-value: 1.8E-49
score: 168.4
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 24..268
score: 29.052
IPR001254Serine proteases, trypsin domainCDDcd00190Tryp_SPccoord: 40..265
e-value: 1.58358E-69
score: 215.988
NoneNo IPR availableGENE3D2.40.10.10coord: 132..271
e-value: 8.6E-41
score: 139.0
NoneNo IPR availableGENE3D2.40.10.10coord: 70..131
e-value: 6.1E-20
score: 70.5
NoneNo IPR availableGENE3D2.40.10.10coord: 38..69
e-value: 1.3E-8
score: 34.4
IPR018114Serine proteases, trypsin family, histidine active sitePROSITEPS00134TRYPSIN_HIScoord: 76..81
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 3..268

Blast
[Close]
BLAST of TCONS_00063441-protein vs. Swiss-Prot (Human)
Match: CTRL (Chymotrypsin-like protease CTRL-1 OS=Homo sapiens GN=CTRL PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.724e-38
Identity = 83/253 (32.81%), Postives = 125/253 (49.41%), Query Frame = 0 
Query:   25 CGKPIKKRTMESSNYVSPG------YFPWQAAVKKTVISNFNGLPDCGATLISNEWLVSAAHCNITVGDHVVLGANYIGLSVEESRQYFRVKFVRPHPSYSKVTNDYDIALVQLDKPATYTDYVRPACIINSGTKLAAATKSEVSGWGLLKCGG---PENLQKGEISISSNDVCNQIYGNKEVTPRMLCAKHPAGGREGCLGDGGGPLVVDVKQNQQFYLAGVVSWGTK-CRHGFPEVFANVSTLREWLQEEL 267
            CG P  K  +  S  +  G       +PWQ +++ +     +G   CG +LIS  W+V+AAHCN++ G H V+   Y   S  E  Q   V     HPS++  T + D+ L++L  PA YT  + P C+ +S   L        +GWG L   G   P +LQ+  + + + + C Q +G+  +T  M+CA     G   C GD GGPLV   ++   + L G+VSWGTK C    P V+  VS    W+ + +
Sbjct:   19 CGIPAIKPALSFSQRIVNGENAVLGSWPWQVSLQDS-----SGFHFCGGSLISQSWVVTAAHCNVSPGRHFVVLGEYDRSSNAEPLQVLSVSRAITHPSWNSTTMNNDVTLLKLASPAQYTTRISPVCLASSNEALTEGLTCVTTGWGRLSGVGNVTPAHLQQVALPLVTVNQCRQYWGS-SITDSMICAG--GAGASSCQGDSGGPLV--CQKGNTWVLIGIVSWGTKNCNVRAPAVYTRVSKFSTWINQVI 261
The following BLAST results are available for this feature:
BLAST of TCONS_00063441-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CTRL1.724e-3832.81Chymotrypsin-like protease CTRL-1 OS=Homo sapiens ... [more]
back to top