TCONS_00063733-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063733-protein
Unique NameTCONS_00063733-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length104

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063733-protein ID=TCONS_00063733-protein|Name=TCONS_00063733-protein|organism=Clytia hemisphaerica|type=polypeptide|length=104bp
MSKVSLLILAAVVAVATANNYVRVCYYTNWAQYRPAPMKFFPEDIDPNLC
THVIYAFAKLGRNSELAMYEWNDDKMYPRVMALKKKNPALKVLLAVGGWN
HENG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039956XLOC_039956Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063733TCONS_00063733Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001223Glyco_hydro18_cat
IPR017853Glycoside_hydrolase_SF
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.20.20.80coord: 10..104
e-value: 7.4E-28
score: 97.4
IPR001223Glycoside hydrolase family 18, catalytic domainPFAMPF00704Glyco_hydro_18coord: 24..101
e-value: 6.6E-19
score: 68.7
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 22..101

Blast
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BLAST of TCONS_00063733-protein vs. Swiss-Prot (Human)
Match: CHIT1 (Chitotriosidase-1 OS=Homo sapiens GN=CHIT1 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.723e-29
Identity = 45/77 (58.44%), Postives = 57/77 (74.03%), Query Frame = 0 
Query:   24 VCYYTNWAQYRPAPMKFFPEDIDPNLCTHVIYAFAKLGRNSELAMYEWNDDKMYPRVMALKKKNPALKVLLAVGGWN 100
            VCY+TNWAQYR    +F P+D+DP+LCTH+IYAFA +  N +L+  EWND+ +Y     LKK NP LK LLA+GGWN
Sbjct:   25 VCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAGM-TNHQLSTTEWNDETLYQEFNGLKKMNPKLKTLLAIGGWN 100
The following BLAST results are available for this feature:
BLAST of TCONS_00063733-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CHIT14.723e-2958.44Chitotriosidase-1 OS=Homo sapiens GN=CHIT1 PE=1 SV... [more]
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