TCONS_00063826-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063826-protein
Unique NameTCONS_00063826-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length170

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063826-protein ID=TCONS_00063826-protein|Name=TCONS_00063826-protein|organism=Clytia hemisphaerica|type=polypeptide|length=170bp
MCSHTIVETQPMVVLRMFITFSIVFAYVADCTDKSDRSHAYGLVSATFAA
SLITSPALGAYLGSVYSDSVVVALATAIALLDMLFILVCVPESLPERLRP
VSWGKSIPWEKADPFSLNVACIKGQEAANEQIISSHFIQRSRWETATAHQ
LSLKQQSKPSGSKFEMTPAW
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040017XLOC_040017Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063826TCONS_00063826Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 20..120
e-value: 3.7E-10
score: 39.2
NoneNo IPR availableGENE3D1.20.1250.20coord: 10..136
e-value: 9.7E-11
score: 40.7
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 12..91
e-value: 3.59313E-5
score: 40.3749
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 19..105

Blast
[Close]
BLAST of TCONS_00063826-protein vs. Swiss-Prot (Human)
Match: MF14A (Hippocampus abundant transcript 1 protein OS=Homo sapiens GN=MFSD14A PE=1 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 7.401e-45
Identity = 73/98 (74.49%), Postives = 85/98 (86.73%), Query Frame = 0 
Query:   19 ITFSIVFAYVADCTDKSDRSHAYGLVSATFAASLITSPALGAYLGSVYSDSVVVALATAIALLDMLFILVCVPESLPERLRPVSWGKSIPWEKADPFS 116
            +TFS+VFAYVAD T + +RS AYGLVSATFAASL+TSPA+GAYLG VY DS+VV LATAIALLD+ FILV VPESLPE++RP SWG  I WE+ADPF+
Sbjct:  138 VTFSVVFAYVADITQEHERSMAYGLVSATFAASLVTSPAIGAYLGRVYGDSLVVVLATAIALLDICFILVAVPESLPEKMRPASWGAPISWEQADPFA 235
The following BLAST results are available for this feature:
BLAST of TCONS_00063826-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MF14A7.401e-4574.49Hippocampus abundant transcript 1 protein OS=Homo ... [more]
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