TCONS_00063885-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063885-protein
Unique NameTCONS_00063885-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length273

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063885-protein ID=TCONS_00063885-protein|Name=TCONS_00063885-protein|organism=Clytia hemisphaerica|type=polypeptide|length=273bp
MLRLAFIFSSCWIVACYACSDTDEDCGRFKDLCGVNSYVDKHCVKSCERC
GGEGGATTTTTTASPGNGNSATTSTATTHPMATKVPCVDNDPDCPGLVDL
CGINSYVDKYCLKTCPEACKKLNNGDGDGGESQGNKNAKCGVSKVSQPRV
VNGVEAQPGAWPWIISLQTVRGSHFCGGTILTPTWILTASHCVKKYKEIP
GFFMIVAGAHDKELSEQSQQRIEAKRIIVHPEYGRYDEFSADIALIQLET
PLRLNDRVVKACMPQQGVYPKVG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040049XLOC_040049Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063885TCONS_00063885Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR001254Trypsin_dom
IPR003582ShKT_dom
IPR018114TRYPSIN_HIS
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001314Peptidase S1A, chymotrypsin familyPRINTSPR00722CHYMOTRYPSINcoord: 238..252
score: 36.03
coord: 177..192
score: 48.92
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 149..273
e-value: 9.8E-6
score: 0.5
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 150..273
e-value: 8.8E-30
score: 104.1
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 150..273
score: 16.784
IPR001254Serine proteases, trypsin domainCDDcd00190Tryp_SPccoord: 150..273
e-value: 3.1829E-39
score: 137.023
IPR003582ShKT domainSMARTSM00254ShkT_1coord: 18..51
e-value: 0.0079
score: 25.4
coord: 86..120
e-value: 5.1
score: 13.4
IPR003582ShKT domainPFAMPF01549ShKcoord: 86..115
e-value: 0.026
score: 14.9
coord: 19..50
e-value: 0.013
score: 15.9
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 87..119
score: 7.442
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 19..50
score: 7.284
NoneNo IPR availableGENE3D2.40.10.10coord: 149..160
e-value: 3.9E-4
score: 19.6
NoneNo IPR availableGENE3D2.40.10.10coord: 161..181
e-value: 1.7E-19
score: 69.2
NoneNo IPR availableGENE3D2.40.10.10coord: 182..269
e-value: 1.9E-26
score: 91.5
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..16
score: 5.0
IPR018114Serine proteases, trypsin family, histidine active sitePROSITEPS00134TRYPSIN_HIScoord: 187..192
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 139..269

Blast
[Close]
BLAST of TCONS_00063885-protein vs. Swiss-Prot (Human)
Match: APOA (Apolipoprotein(a) OS=Homo sapiens GN=LPA PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.610e-25
Identity = 48/115 (41.74%), Postives = 70/115 (60.87%), Query Frame = 0 
Query:  150 VVNGVEAQPGAWPWIISLQTVRGSHFCGGTILTPTWILTASHCVKKYKEIPGFFMIVAGAHDKELSEQSQQRIEAKRIIVHPEYGRYDEFSADIALIQLETPLRLNDRVVKACMP 264
            +V G  A P +WPW +SL+T  G HFCGGT+++P W+LTA+HC+KK    P  + ++ GAH +   E   Q IE  R+ + P         ADIAL++L  P  + D+V+ AC+P
Sbjct: 4328 IVGGCVAHPHSWPWQVSLRTRFGKHFCGGTLISPEWVLTAAHCLKK-SSRPSSYKVILGAHQEVNLESHVQEIEVSRLFLEPT-------QADIALLKLSRPAVITDKVMPACLP 4434
The following BLAST results are available for this feature:
BLAST of TCONS_00063885-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
APOA2.610e-2541.74Apolipoprotein(a) OS=Homo sapiens GN=LPA PE=1 SV=1[more]
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