TCONS_00063886-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063886-protein
Unique NameTCONS_00063886-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length333

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063886-protein ID=TCONS_00063886-protein|Name=TCONS_00063886-protein|organism=Clytia hemisphaerica|type=polypeptide|length=333bp
MYLRSIAIFLVVYWFETHGFKRLERCYDPKQRWRCKIRVKFYKNFCSDEL
RKQTCIKSCGGCKIGPVTPKRKCGISNAFQGRVVNGENAPEGAYPWIGSL
QFRKPGTKKHICGATLIYPRWVLSAAHCFSFEKANIDDVLPLLRVEFGIH
NQNKTEPSSQVRRISMLIQSPDLQVIPEQNTIYGDLILIELEKTVMLNDR
VNIPCLPDKEDYPTIGQNCVVAGWGSIKWPSEKTGGILQQARLPVVGPNH
IGCRNNTEVICVGYGFGTQLSGKHHPNACKGDSGGPLVCQKQSGNWEFVG
VASYVHTLCKYYTAYAPVGKYMSWISSYVPAHF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040050XLOC_040050Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063886TCONS_00063886Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR001254Trypsin_dom
IPR018114TRYPSIN_HIS
IPR033116TRYPSIN_SER
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001314Peptidase S1A, chymotrypsin familyPRINTSPR00722CHYMOTRYPSINcoord: 181..195
score: 28.24
coord: 276..288
score: 64.39
coord: 113..128
score: 55.28
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 82..325
e-value: 3.0E-53
score: 192.9
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 83..325
e-value: 8.1E-43
score: 146.7
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 83..330
score: 27.162
IPR001254Serine proteases, trypsin domainCDDcd00190Tryp_SPccoord: 83..327
e-value: 4.46583E-56
score: 183.246
NoneNo IPR availableGENE3D2.40.10.10coord: 83..117
e-value: 1.8E-16
score: 59.5
NoneNo IPR availableGENE3D2.40.10.10coord: 204..331
e-value: 3.4E-25
score: 88.3
NoneNo IPR availableGENE3D2.40.10.10coord: 118..203
e-value: 5.2E-21
score: 74.3
IPR018114Serine proteases, trypsin family, histidine active sitePROSITEPS00134TRYPSIN_HIScoord: 123..128
IPR033116Serine proteases, trypsin family, serine active sitePROSITEPS00135TRYPSIN_SERcoord: 277..288
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 65..329

Blast
[Close]
BLAST of TCONS_00063886-protein vs. Swiss-Prot (Human)
Match: CTRB2 (Chymotrypsinogen B2 OS=Homo sapiens GN=CTRB2 PE=2 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 2.527e-35
Identity = 87/257 (33.85%), Postives = 125/257 (48.64%), Query Frame = 0 
Query:   82 RVVNGENAPEGAYPWIGSLQFRKPGTKKHICGATLIYPRWVLSAAHCFSFEKANIDDVLPLLRVEFGIHNQNKTEPSSQVRRISMLIQSPDLQVIPEQNTIYGDLILIELEKTVMLNDRVNIPCLPDKEDYPTIGQNCVVAGWGSIKWPSEKTGGILQQARLPVVG----PNHIGCRNNTEVICVGYGFGTQLSGKHHPNACKGDSGGPLVCQKQSGNWEFVGVASYVHTLCKYYT--AYAPVGKYMSWISSYVPAH 332
            R+VNGE+A  G++PW  SLQ +   T  H CG +LI   WV++AAHC         DV     V  G  +Q   E + QV +I+ + ++P   ++    T+  D+ L++L      +  V+  CLP  +D    G  C   GWG  K+ + KT   LQQA LP++         G R    +IC         +G    ++C GDSGGPLVCQK  G W  VG+ S+    C   T   YA V K + W+   + A+
Sbjct:   33 RIVNGEDAVPGSWPWQVSLQDK---TGFHFCGGSLISEDWVVTAAHC----GVRTSDV-----VVAGEFDQGSDEENIQVLKIAKVFKNPKFSIL----TVNNDITLLKLATPARFSQTVSAVCLPSADDDFPAGTLCATTGWGKTKYNANKTPDKLQQAALPLLSNAECKKSWGRRITDVMIC---------AGASGVSSCMGDSGGPLVCQKD-GAWTLVGIVSWGSRTCSTTTPAVYARVAKLIPWVQKILAAN 263
The following BLAST results are available for this feature:
BLAST of TCONS_00063886-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CTRB22.527e-3533.85Chymotrypsinogen B2 OS=Homo sapiens GN=CTRB2 PE=2 ... [more]
back to top