TCONS_00063966-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00063966-protein
Unique Name	TCONS_00063966-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	513

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00063966-protein ID=TCONS_00063966-protein|Name=TCONS_00063966-protein|organism=Clytia hemisphaerica|type=polypeptide|length=513bp
MEGDGEHSVTNNVENEDPELIESETVDENEILVNQNKIFNHESEDDEDED
EADDEKPLLGSTSKKNSSPKEKKKIATTKMSALLHDEEIKVSKKRWLMLF
IFSLNTLMNGVLMVGLSPVTNLVSKHYNQSPTLIEWSTNIFLFLYIWFAI
PASYLTNKFGIRKALILTCCLNVLSTVFHMPGYHSNRFFYYFVGQIPAAI
SYSFVLQMPSQISACWFPVNERASSTAIGAFMNTFGVALAYLQSTNIVTE
QITEVNIEDDVKSLFLFQMVIAVLVAIITIAFFIEKPDNPPSTINKTVFD
PNFFESIKILMKDYNFVLLSQTFGVCTGILYTLAVLINPLITAKFPVGHV
KMIGWLGFTFLMISYASSSIFAIWIDKFSSYRTISILLNICSFWVWLLFT
VFFLETNDFTILFFLFTILGFVGLPYSYLGLEHAVEVTYPIPESTSSVFI
LMVSNLYTFIFVLAFGEMINSRYLYLTCYSFLFLYGVSSTLAIITKTELK
RKKAELKQKLGEF

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_040091	XLOC_040091	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00063966	TCONS_00063966	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011701	MFS
IPR020846	MFS_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 496..513
None	No IPR available	GENE3D	1.20.1250.20		coord: 88..297 e-value: 3.7E-23 score: 81.4
None	No IPR available	GENE3D	1.20.1250.20		coord: 304..510 e-value: 3.0E-8 score: 32.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..73
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 102..425 e-value: 2.6E-19 score: 69.3
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 99..494 e-value: 5.13052E-18 score: 83.1321
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 86..505

Blast

[Close]

BLAST of TCONS_00063966-protein vs. Swiss-Prot (Human)
Match: FLVC2 (Feline leukemia virus subgroup C receptor-related protein 2 OS=Homo sapiens GN=FLVCR2 PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 2.757e-50
Identity = 125/439 (28.47%), Postives = 216/439 (49.20%), Query Frame = 0

Query:   89 IKVSKKRWLMLFIFSLNTLMNGVLMVGLSPVTNLVSKHYNQSPTLIEWSTNIFLFLYIWFAIPASYLTNKFGIRKALILTCCLNVLSTVFHMPGYHSNRFFYYFVGQIPAAISYSFVLQMPSQISACWFPVNERASSTAIGAFMNTFGVALAYLQSTNIVTEQITEVNIED------DVKSLFLFQMVIAVLVAIITIAFFIEKPDNPPSTINKTVF-----DPNFFESIKILMKDYNFVLLSQTFGVCTGILYTLAVLINPLITAKFPVGHVKMIGWLGFTFLMISYASSSIFAIWIDKFSSYRTISILLNICSFWVWLLFTVFFLETNDFTILFFLFTILGFVGLPYSYLGLEHAVEVTYPIPESTSSVFILMVSNLYTFIFVLAFGEMINSRYLYLTCYSFLFL---YGVSSTLAIITKTELKRKKAE---LKQKL 510
            IKVS++RW ++ +FS  ++ N    +    + N+    Y  S   I+W +  ++  YI   +P ++L  KFG+R   +    LN L     +     + F    VGQ+  +++  F+L MPS+I++ WF  NE +++ ++  F N  G+A+ +L    +V       NIED       +  +F     +A L+ I+ I  F EKP  PPS      +     D ++  SI  L K+ NFVLL  T+G+  G  Y L+ L+N ++   +P G     G +G T ++     + I  IW+D+  +Y+  ++++ I +  V ++   F L      ++F     +GF    Y  LG E AVE+TYP  E  SS  + + + ++  IF ++ G++I++   Y T    +FL     + + L    K +L+R+KA    L+ KL
Sbjct:   78 IKVSRRRWAVVLVFSCYSMCNSFQWIQYGSINNIFMHFYGVSAFAIDWLSMCYMLTYIPLLLPVAWLLEKFGLRTIALTGSALNCLGAWVKLGSLKPHLFPVTVVGQLICSVAQVFILGMPSRIASVWFGANEVSTACSVAVFGNQLGIAIGFLVPPVLVP------NIEDRDELAYHISIMFYIIGGVATLLLILVIIVFKEKPKYPPSRAQSLSYALTSPDASYLGSIARLFKNLNFVLLVITYGLNAGAFYALSTLLNRMVIWHYP-GEEVNAGRIGLTIVIAGMLGAVISGIWLDRSKTYKETTLVVYIMTL-VGMVVYTFTLNLGHLWVVFITAGTMGFFMTGYLPLGFEFAVELTYPESEGISSGLLNISAQVFGIIFTISQGQIIDN---YGTKPGNIFLCVFLTLGAALTAFIKADLRRQKANKETLENKL 505

The following BLAST results are available for this feature:

BLAST of TCONS_00063966-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00063966-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
FLVC2	2.757e-50	28.47	Feline leukemia virus subgroup C receptor-related ...	[more]

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TCONS_00063966-protein (polypeptide) - C. hemisphaerica