TCONS_00064048-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00064048-protein
Unique Name	TCONS_00064048-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	656

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00064048-protein ID=TCONS_00064048-protein|Name=TCONS_00064048-protein|organism=Clytia hemisphaerica|type=polypeptide|length=656bp
MVGNKMTTRFSFNNLLIFIAAFGAVSAWTRNYRNGGPSNQNAPDNVWKWE
CSHEAIRNLTVIPRCKKVHRNEASSKATELSTCKLTCGEASMLFPKPSGK
TKLSKKVVPFAPYRVKLSSLKLSKNGKFTRRVNQLIRFAFGSFKRTLHQG
VYRQQVYRGWNLQGRTIESSKRSMEISIILETNAEKLTLYTDESYSLKVN
TNNRLISVTIKAKNFFGARHALETLSQLTAYHQGHNSLQIIDYADIYDKP
AYPYRGVLLDTSRNFYSVPSIRRLIKTMSYNKLNTFHWHITDTHSFPIFI
KSVPQLTQYGAYSNTRVYTPRQVKQIVEYGRQHGVRVLPEFDQPAHTGEG
WQFGEKEGLGKLAVCVNKEPWQKFCLEPPCGQLNPINQNLYHILSKIYKE
YFDLFDPDLFHAGGDEINFNCWNTTKEITDWLHTNYGGRNEEEMMRMWNL
FLEKSSKKIYEANDGKEIPLILWTSKMTSIKYLNRFLNPKQHIIQIWTST
KNKGIVDIVNSGFKTIFTNWNTLYLDCGVGSWVGEGNNWCSPYKDWKQLY
DNDPIKILKDLNVNVTAQIRKNILGQEAPLWSEQADESVSEAKIWPRAAA
LAERLWTNPEHNWRKAEYRLVYHRQRLVNRGIRADALQPLWCKQNSGHCY
YDPTVV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_040156	XLOC_040156	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00064048	TCONS_00064048	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR025705	Beta_hexosaminidase_sua/sub
IPR015883	Glyco_hydro_20_cat
IPR029019	HEX_eukaryotic_N
IPR017853	Glycoside_hydrolase_SF
IPR029018	Chitobiase/Hex_dom_2-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0004563	beta-N-acetylhexosaminidase activity
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004563	beta-N-acetylhexosaminidase activity
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025705	Beta-hexosaminidase	PRINTS	PR00738	GLHYDRLASE20	coord: 246..263 score: 56.06 coord: 573..589 score: 40.37 coord: 275..296 score: 46.49 coord: 405..418 score: 42.53 coord: 590..607 score: 47.22 coord: 329..346 score: 53.28 coord: 383..401 score: 26.08 coord: 208..228 score: 43.07
IPR025705	Beta-hexosaminidase	PIRSF	PIRSF001093	B-hxosamndse_ab_euk_	coord: 53..654 e-value: 8.8E-155 score: 514.4
None	No IPR available	GENE3D	3.30.379.10		coord: 87..249 e-value: 8.5E-17 score: 61.3
None	No IPR available	GENE3D	3.20.20.80		coord: 250..651 e-value: 9.5E-110 score: 366.6
None	No IPR available	CDD	cd06562	GH20_HexA_HexB-like	coord: 252..631 e-value: 9.36059E-151 score: 442.037
IPR015883	Glycoside hydrolase family 20, catalytic domain	PFAM	PF00728	Glyco_hydro_20	coord: 252..608 e-value: 9.3E-91 score: 304.8
IPR029019	Beta-hexosaminidase, eukaryotic type, N-terminal	PFAM	PF14845	Glycohydro_20b2	coord: 94..228 e-value: 9.3E-14 score: 52.2
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 252..620
IPR029018	Chitobiase/beta-hexosaminidase domain 2-like	SUPERFAMILY	55545	beta-N-acetylhexosaminidase-like domain	coord: 133..250

Blast

[Close]

BLAST of TCONS_00064048-protein vs. Swiss-Prot (Human)
Match: HEXB (Beta-hexosaminidase subunit beta OS=Homo sapiens GN=HEXB PE=1 SV=3)

HSP 1 Score: 220.705 bits (561), Expect = 7.435e-64
Identity = 152/482 (31.54%), Postives = 235/482 (48.76%), Query Frame = 0

Query:  172 RSMEISIILETNAEKL-TLYTDESYSLKVNTNNRLISVTIKAKNFFGARHALETLSQLTAYHQGHNSLQIIDYADIYDKPAYPYRGVLLDTSRNFYSVPSIRRLIKTMSYNKLNTFHWHITDTHSFPIFIKSVPQLTQYGAYSNTRVYTPRQVKQIVEYGRQHGVRVLPEFDQPAHTGEGWQFGEKEGLGKLAVCVNKEPWQKFCLEPPCGQLNPINQNLYHILSKIYKEYFDLFDPDLFHAGGDEINFNCWNTTKEITDWLHTNYGGRNEEEMMRMWNLFLEKSSKKIYEANDGKEIPLILWTSKMTSIKYLNRFLNPKQHIIQIW-TSTKNKGIVDIVNSGFKTIFTN-WNTLYLDCGVGSWVGEGNNWCSPYKDWKQLYDNDPIKILKDLNVNVTAQIRKNILGQEAPLWSEQADESVSEAKIWPRAAALAERLWTNPE-HNWRKAEYRLVYHRQRLVNRGIRADALQPLWCKQNSGHC 649
            + + +SI L++  +    + +DESY+L V          +KA   +GA   LET SQL  Y   + +   I+ + I D P + +RG+L+DTSR++  V  I + +  M++NK N  HWHI D  SFP    + P+L+  G+YS + VYTP  V+ ++EY R  G+RVLPEFD P HT   W  G+K+ L       NK     F      G +NP     Y  L+  +KE  ++F     H GGDE+ F CW +  +I D++     G +     ++ + +++K    I   N G     I+W         L         I+++W  S   + +  +  SGF  I +  W   YLD              S  +DW++ Y  +P      L+   T + ++  +G EA LW E  D +    ++WPRA+A+ ERLW++ +  +   A  RL  HR R+V RGI A   QPL+    +G+C
Sbjct:  125 QQLLVSITLQSECDAFPNISSDESYTLLVKEP----VAVLKANRVWGALRGLETFSQLV-YQDSYGTF-TINESTIIDSPRFSHRGILIDTSRHYLPVKIILKTLDAMAFNKFNVLHWHIVDDQSFPYQSITFPELSNKGSYSLSHVYTPNDVRMVIEYARLRGIRVLPEFDTPGHT-LSWGKGQKDLLTPCYSRQNK--LDSF------GPINPTLNTTYSFLTTFFKEISEVFPDQFIHLGGDEVEFKCWESNPKIQDFMRQKGFGTD---FKKLESFYIQKVLDIIATINKGS----IVWQEVFDDKAKLA-----PGTIVEVWKDSAYPEELSRVTASGFPVILSAPW---YLDL------------ISYGQDWRKYYKVEP------LDFGGTQKQKQLFIGGEACLWGEYVDATNLTPRLWPRASAVGERLWSSKDVRDMDDAYDRLTRHRCRMVERGIAA---QPLY----AGYC 551

The following BLAST results are available for this feature:

BLAST of TCONS_00064048-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00064048-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
HEXB	7.435e-64	31.54	Beta-hexosaminidase subunit beta OS=Homo sapiens G...	[more]

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TCONS_00064048-protein (polypeptide) - C. hemisphaerica