TCONS_00064169-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00064169-protein
Unique Name	TCONS_00064169-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	824

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00064169-protein ID=TCONS_00064169-protein|Name=TCONS_00064169-protein|organism=Clytia hemisphaerica|type=polypeptide|length=824bp
MRKMAALWIPLCFCFISLVTRGVYTLGNEAHDSHDLHGDDDHDHGEKHHG
EDIFDELYKELNGTNDELTTDNLEKFFTKLHLKSCFPVKQDGCNTCFNIT
QLLSWYGVTAPINETQFYKLSPGLLYILSETFNNTERKSKDCASISQSKT
LVSEVQNLFKTFQKKYGKYGNSEKETEESLEHLLEKINGTIGENLSHVEK
CFDAHDILAKADTHHALKTQDELQVISSHILYQIFEQKCISGGEKKEHEH
DELPEAGSFVESIFKEFGQNKSEMTRKEFAHFYEDIELGEMHVEGGHEEE
GEGGGHDHDHKRRRRDTHEDDDEEGHAHEHNELNKCFTANEIMEIYSVHG
DESVDQGTFQKMCPSLLYQLDKKTCVKKNEGSKRSIENDTWKAWVGMFIS
ISVVSIGSLSGIIAAPISKKSWFPYLIMCLISLAVATLIGDAILHLFPHA
MELHQHKPGESHGNPLFKFDSYLWKSIAFLMGLYIFFLFEILMHAFGGEH
SHSHGVEKHVASSSTNNTSNVKGTLGMSEGASVLYNNQIKNNSILRPSGL
HECSPTDTECSGDCPEAENKSECSSAQENTESETETIPPSSPTSTDLMLE
KNGSREILVLSEEEKQKNKYHLNNGYHGDNNSDQNGSISRGVHDQHLETE
ENKPLSLAKLKSIAWMVLIGDAIHNFLDGIAIGVAFSETWPDGLHGGIST
SIAILCHELPHELGDFAVLLNSGLSIKQALVMNFISSLTAFIGGIIGVSL
GTQWAATNWIFAITAGLFVYIALVDMLPEILHSSSLKRHPWFCIMLTNIG
LWCGFMIMIALGAWEEDIKSVLKQ

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_040235	XLOC_040235	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00064169	TCONS_00064169	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003689	ZIP

Vocabulary: **Biological Process**
Term	Definition
GO:0030001	metal ion transport
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0046873	metal ion transmembrane transporter activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030001	metal ion transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0046873	metal ion transmembrane transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.238.10		coord: 43..379 e-value: 0.025 score: 13.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 621..640
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 295..333
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 555..600
IPR003689	Zinc/iron permease	PFAM	PF02535	Zip	coord: 393..811 e-value: 1.9E-67 score: 227.7

Blast

[Close]

BLAST of TCONS_00064169-protein vs. Swiss-Prot (Human)
Match: S39AA (Zinc transporter ZIP10 OS=Homo sapiens GN=SLC39A10 PE=1 SV=2)

HSP 1 Score: 248.825 bits (634), Expect = 1.237e-70
Identity = 185/552 (33.51%), Postives = 277/552 (50.18%), Query Frame = 0

Query:  314 RRDTHEDDDEEGHAHEHNELNKCFTANEIMEIYSVHGDESVDQGTFQKMCPSLLYQLDKKTCVKK---------NEGSKRSIENDT---WKAWVGMFISISVVSIGSLSGIIAAPISKKSWFPYLIMCLISLAVATLIGDAILHLFPHAMELHQHKPGESHGNP----------LFKFDSYLWKSIAFLMGLYIFFLFEILMHAFGGEHSHSHGVEKHVASSSTNNTSNVKGTLGMSEGASVLYNNQIKNNSILRPSGLHECSPTDTECSGDCPEAENKSECSSAQENTESETETIPPSSPTSTDLMLEKNGSREILVLSEEEKQKNKYHLNNGYH----------GDNNSDQNGSISRGVHDQHLET---------EENKPLSLAKLKSIAWMVLIGDAIHNFLDGIAIGVAFSETWPDGLHGGISTSIAILCHELPHELGDFAVLLNSGLSIKQALVMNFISSLTAFIGGIIGVSLGTQWA--ATNWIFAITAGLFVYIALVDMLPEILHSSSLKRHPWFC----IMLTNIGLWCGFMIMIALGAWEEDI 818
            R+D +EDD    H HE      C    ++++ Y    +  +    F  +CP+LLYQ+D + C++          N+      E++      AW+   ISI+V+S+ SL G+I  PI  +  F +L+  L++LAV T+ GDA+LHL PH+   H H    +HG+           L ++D+ L K +  L G+Y+ F+ E  +  F   +    G +K     +T  +     T+G       L N    +   L+P      + TD                S   E+  +ETE         TDL  ++    +  +  EEEK  +  H ++G H            N+  +N ++ R  + Q                  L    + +IAWMV++GD IHNF DG+AIG AFS     GL GGISTSIA+ CHELPHELGDFAVLL +G+++KQA+V N +S++ A+IG +IG ++G Q+A   T WIFA+TAG+F+Y+ALVDMLPE+LH         FC     +L N+GL  GF IM+ +  +E+ I
Sbjct:  325 RKDLNEDD----HHHE------CLNVTQLLKYYGHGANSPISTDLFTYLCPALLYQIDSRLCIEHFDKLLVEDINKDKNLVPEDEANIGASAWICGIISITVISLLSLLGVILVPIINQGCFKFLLTFLVALAVGTMSGDALLHLLPHSQGGHDHSHQHAHGHGHSHGHESNKFLEEYDAVL-KGLVALGGIYLLFIIEHCIRMFK-HYKQQRGKQKWFMKQNTEES-----TIGRKLSDHKLNNTPDSDWLQLKP-----LAGTDD---------------SVVSEDRLNETEL--------TDLEGQQESPPKNYLCIEEEKIIDHSH-SDGLHTIHEHDLHAAAHNHHGENKTVLRKHNHQWHHKHSHHSHGPCHSGSDLKETGIANIAWMVIMGDGIHNFSDGLAIGAAFSA----GLTGGISTSIAVFCHELPHELGDFAVLLKAGMTVKQAIVYNLLSAMMAYIGMLIGTAVG-QYANNITLWIFAVTAGMFLYVALVDMLPEMLHGDGDNEEHGFCPVGQFILQNLGLLFGFAIMLVIALYEDKI 825

The following BLAST results are available for this feature:

BLAST of TCONS_00064169-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00064169-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S39AA	1.237e-70	33.51	Zinc transporter ZIP10 OS=Homo sapiens GN=SLC39A10...	[more]

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TCONS_00064169-protein (polypeptide) - C. hemisphaerica