TCONS_00064200-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064200-protein
Unique NameTCONS_00064200-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length496

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064200-protein ID=TCONS_00064200-protein|Name=TCONS_00064200-protein|organism=Clytia hemisphaerica|type=polypeptide|length=496bp
PPGLTTEKTNNSILSDLDQVVASFTSVHTTSQENQQKEQVVRSISHSLQA
TVNETEGLPILPVNLHPALHLETVVQNSGVAEQALLKDDVPMLPAIKMKD
PEQEKKRRKIPGTCDICGKQFKSTTNIAAHRKLHTEEKKFECPQCGKKFR
RKLHLTRHVKSHAGIKGFSCEICDAKFSSKWYMQAHAVIHTGDKPFQCTI
CEKRFNNKANLKKHKLTHGNQRPYVCNVCGQTYRQSYDLKRHMASHTDPV
ISFTCLQCGKIFARKSYLRRHLLIHTSERKYECTHCGRKFLQRGQLNFHV
KNQHKTMRNESNNSETDADMRDSIKPRLPDCRGENSELIEPRLSSENDNY
SINDSNKTSVYAIRDSERLPERVKISRKSSEDDDNNEKREVLYSKVFDKL
SVMPTKQNEIANRCDKIEAVSKQNFNEIIPLDRDGQQRSYVDLLLSPDDN
DRALTTKTLSFDNDKEQSRKSRVVRDISNSLNLTPRNCKIVRKSEF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040253XLOC_040253Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064200TCONS_00064200Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 281..304
e-value: 0.0032
score: 26.7
coord: 224..246
e-value: 3.0E-4
score: 30.1
coord: 253..275
e-value: 0.0012
score: 28.1
coord: 196..218
e-value: 2.0E-4
score: 30.7
coord: 168..190
e-value: 0.013
score: 24.7
coord: 112..134
e-value: 0.28
score: 20.2
coord: 140..162
e-value: 9.2E-5
score: 31.8
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 283..304
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 114..134
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 226..246
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 142..162
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 170..190
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 198..218
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 255..275
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 196..223
score: 13.9
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 112..139
score: 12.736
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 224..251
score: 11.177
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 140..167
score: 14.087
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 253..280
score: 14.586
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 168..195
score: 12.799
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 281..309
score: 11.739
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 149..205
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 253..301
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 113..162
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 194..246
NoneNo IPR availableGENE3D3.30.160.60coord: 283..306
e-value: 7.4E-6
score: 25.4
NoneNo IPR availableGENE3D2.10.110.10coord: 234..282
e-value: 5.2E-22
score: 77.3
NoneNo IPR availableGENE3D3.30.160.60coord: 125..149
e-value: 3.7E-15
score: 55.5
NoneNo IPR availableGENE3D3.30.160.60coord: 179..206
e-value: 9.9E-17
score: 60.3
coord: 207..233
e-value: 1.3E-19
score: 69.6
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 196..218
e-value: 5.6E-5
score: 23.3
coord: 113..134
e-value: 0.0077
score: 16.5
coord: 140..162
e-value: 9.4E-5
score: 22.6
coord: 253..275
e-value: 5.3E-5
score: 23.4
coord: 224..246
e-value: 5.8E-6
score: 26.4
NoneNo IPR availableGENE3D2.10.69.10coord: 150..178
e-value: 8.0E-16
score: 57.5
NoneNo IPR availablePFAMPF12874zf-metcoord: 168..186
e-value: 0.0027
score: 17.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 302..351
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 22..124
e-value: 7.5E-6
score: 25.7

Blast
BLAST of TCONS_00064200-protein vs. Swiss-Prot (Human)
Match: OZF (Zinc finger protein OZF OS=Homo sapiens GN=ZNF146 PE=1 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 7.408e-46
Identity = 81/191 (42.41%), Postives = 108/191 (56.54%), Query Frame = 0
Query:  111 PGTCDICGKQFKSTTNIAAHRKLHTEEKKFECPQCGKKFRRKLHLTRHVKSHAGIKGFSCEICDAKFSSKWYMQAHAVIHTGDKPFQCTICEKRFNNKANLKKHKLTHGNQRPYVCNVCGQTYRQSYDLKRHMASHTDPVISFTCLQCGKIFARKSYLRRHLLIHTSERKYECTHCGRKFLQRGQLNFHVK 301
            P  C +CGK F   +N+  H   HT EK FEC +CGK F +K ++ +H  +H G K F C  C   FS K  +  H  IHTG+KPF+C  C K F  K+NL +H+ TH  ++P+VC  CG+T+    +L  H   H      F C +CG  F +K YL +H  IHT E+ YEC  CG+ F QR  L  HV+
Sbjct:   15 PFACKVCGKVFSHKSNLTEHEHFHTREKPFECNECGKAFSQKQYVIKHQNTHTGEKLFECNECGKSFSQKENLLTHQKIHTGEKPFECKDCGKAFIQKSNLIRHQRTHTGEKPFVCKECGKTFSGKSNLTEHEKIHIGEK-PFKCSECGTAFGQKKYLIKHQNIHTGEKPYECNECGKAFSQRTSLIVHVR 204          

HSP 2 Score: 151.754 bits (382), Expect = 3.525e-42
Identity = 80/193 (41.45%), Postives = 110/193 (56.99%), Query Frame = 0
Query:  111 PGTCDICGKQFKSTTNIAAHRKLHTEEKKFECPQCGKKFRRKLHLTRHVKSHAGIKGFSCEICDAKFSSKWYMQAHAVIHTGDKPFQCTICEKRFNNKANLKKHKLTHGNQRPYVCNVCGQTYRQSYDLKRHMASHTDPVISFTCLQCGKIFARKSYLRRHLLIHTSERKYECTHCGRKFLQRGQLNFHVKNQ 303
            P  C  CGK F   +N+  H++ HT EK F C +CGK F  K +LT H K H G K F C  C   F  K Y+  H  IHTG+KP++C  C K F+ + +L  H   H   +PY CNVCG+ + QS  L  H+ SHT     + C +CGK F++ S L  HL IHT ++ Y+C+ CG+ F Q+     H+++Q
Sbjct:   99 PFECKDCGKAFIQKSNLIRHQRTHTGEKPFVCKECGKTFSGKSNLTEHEKIHIGEKPFKCSECGTAFGQKKYLIKHQNIHTGEKPYECNECGKAFSQRTSLIVHVRIHSGDKPYECNVCGKAFSQSSSLTVHVRSHTGEK-PYGCNECGKAFSQFSTLALHLRIHTGKKPYQCSECGKAFSQKSH---HIRHQ 287          

HSP 3 Score: 144.05 bits (362), Expect = 2.987e-39
Identity = 76/188 (40.43%), Postives = 104/188 (55.32%), Query Frame = 0
Query:  114 CDICGKQFKSTTNIAAHRKLHTEEKKFECPQCGKKFRRKLHLTRHVKSHAGIKGFSCEICDAKFSSKWYMQAHAVIHTGDKPFQCTICEKRFNNKANLKKHKLTHGNQRPYVCNVCGQTYRQSYDLKRHMASHTDPVISFTCLQCGKIFARKSYLRRHLLIHTSERKYECTHCGRKFLQRGQLNFHVK 301
            C+ CGK F    N+  H+K+HT EK FEC  CGK F +K +L RH ++H G K F C+ C   FS K  +  H  IH G+KPF+C+ C   F  K  L KH+  H  ++PY CN CG+ + Q   L  H+  H+     + C  CGK F++ S L  H+  HT E+ Y C  CG+ F Q   L  H++
Sbjct:   74 CNECGKSFSQKENLLTHQKIHTGEKPFECKDCGKAFIQKSNLIRHQRTHTGEKPFVCKECGKTFSGKSNLTEHEKIHIGEKPFKCSECGTAFGQKKYLIKHQNIHTGEKPYECNECGKAFSQRTSLIVHVRIHSGDK-PYECNVCGKAFSQSSSLTVHVRSHTGEKPYGCNECGKAFSQFSTLALHLR 260          

HSP 4 Score: 138.272 bits (347), Expect = 4.102e-37
Identity = 75/196 (38.27%), Postives = 108/196 (55.10%), Query Frame = 0
Query:  108 RKIPGTCDICGKQFKSTTNIAAHRKLHTEEKKFECPQCGKKFRRKLHLTRHVKSHAGIKGFSCEICDAKFSSKWYMQAHAVIHTGDKPFQCTICEKRFNNKANLKKHKLTHGNQRPYVCNVCGQTYRQSYDLKRHMASHTDPVISFTCLQCGKIFARKSYLRRHLLIHTSERKYECTHCGRKFLQRGQLNFHVKNQ 303
            R+ P  C+ CGK F     +  H+  HT EK FEC +CGK F +K +L  H K H G K F C+ C   F  K  +  H   HTG+KPF C  C K F+ K+NL +H+  H  ++P+ C+ CG  + Q   L +H   HT     + C +CGK F++++ L  H+ IH+ ++ YEC  CG+ F Q   L  HV++ 
Sbjct:   40 REKPFECNECGKAFSQKQYVIKHQNTHTGEKLFECNECGKSFSQKENLLTHQKIHTGEKPFECKDCGKAFIQKSNLIRHQRTHTGEKPFVCKECGKTFSGKSNLTEHEKIHIGEKPFKCSECGTAFGQKKYLIKHQNIHTGEK-PYECNECGKAFSQRTSLIVHVRIHSGDKPYECNVCGKAFSQSSSLTVHVRSH 234          

HSP 5 Score: 130.183 bits (326), Expect = 3.370e-34
Identity = 64/166 (38.55%), Postives = 93/166 (56.02%), Query Frame = 0
Query:  111 PGTCDICGKQFKSTTNIAAHRKLHTEEKKFECPQCGKKFRRKLHLTRHVKSHAGIKGFSCEICDAKFSSKWYMQAHAVIHTGDKPFQCTICEKRFNNKANLKKHKLTHGNQRPYVCNVCGQTYRQSYDLKRHMASHTDPVISFTCLQCGKIFARKSYLRRHLLIHT 276
            P  C  CGK F   +N+  H K+H  EK F+C +CG  F +K +L +H   H G K + C  C   FS +  +  H  IH+GDKP++C +C K F+  ++L  H  +H  ++PY CN CG+ + Q   L  H+  HT     + C +CGK F++KS+  RH  IHT
Sbjct:  127 PFVCKECGKTFSGKSNLTEHEKIHIGEKPFKCSECGTAFGQKKYLIKHQNIHTGEKPYECNECGKAFSQRTSLIVHVRIHSGDKPYECNVCGKAFSQSSSLTVHVRSHTGEKPYGCNECGKAFSQFSTLALHLRIHTGKK-PYQCSECGKAFSQKSHHIRHQKIHT 291          
The following BLAST results are available for this feature:
BLAST of TCONS_00064200-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
OZF7.408e-4642.41Zinc finger protein OZF OS=Homo sapiens GN=ZNF146 ... [more]
back to top