TCONS_00064467-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064467-protein
Unique NameTCONS_00064467-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length99

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064467-protein ID=TCONS_00064467-protein|Name=TCONS_00064467-protein|organism=Clytia hemisphaerica|type=polypeptide|length=99bp
AFNYAKRRKEHMNICPKTFACTKCELIFESPQALKAHDNKHSQKFMCDKP
ECGKCFECASKLSRHQKTHDKSKDIMCPVCSKKFSRKDNMVRHQKTKHK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040430XLOC_040430Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064467TCONS_00064467Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 19..41
e-value: 1.1
score: 18.3
coord: 75..98
e-value: 7.7E-4
score: 28.8
coord: 45..69
e-value: 0.52
score: 19.4
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 47..69
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 77..98
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 45..74
score: 13.277
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 19..46
score: 8.683
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 75..99
score: 11.136
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 46..96
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 77..98
e-value: 5.6E-6
score: 26.4
NoneNo IPR availableGENE3D3.30.160.60coord: 31..54
e-value: 7.7E-10
score: 38.5
NoneNo IPR availableGENE3D3.30.160.60coord: 73..98
e-value: 2.8E-8
score: 33.3
NoneNo IPR availableGENE3D3.30.160.60coord: 1..30
e-value: 4.3E-5
score: 23.1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 55..72
e-value: 3.5E-8
score: 32.9

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064467-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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