TCONS_00064843-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00064843-protein
Unique NameTCONS_00064843-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length112

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00064843-protein ID=TCONS_00064843-protein|Name=TCONS_00064843-protein|organism=Clytia hemisphaerica|type=polypeptide|length=112bp
MSGLGFSLWLLIVFNGYLSGVTAWWTRCEKDDCIMSNWSPWSRCSLATGI
GVQNRNRTVEKIIDEKCKEKDCPKRVDRRKCCKSKCSNSHQPTMSPNSFT
FSQIRSSLKSNT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040670XLOC_040670Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00064843TCONS_00064843Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000884TSP1_rpt
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 35..87
e-value: 6.5E-4
score: 29.0
IPR000884Thrombospondin type-1 (TSP1) repeatPFAMPF00090TSP_1coord: 36..86
e-value: 1.7E-5
score: 24.9
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 30..88
e-value: 9.3E-9
score: 35.0
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 32..87
score: 8.316
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 30..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..112

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064843-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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