TCONS_00064976-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00064976-protein
Unique Name	TCONS_00064976-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	275

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00064976-protein ID=TCONS_00064976-protein|Name=TCONS_00064976-protein|organism=Clytia hemisphaerica|type=polypeptide|length=275bp
NEEYDVIFLVTSFAKHFERRTWIRSSWGLGTTWLNKKNWKVIFNVGSMKH
DAAVISAQLQKEAERYKDLLILDVPEDFHKLSLKVMVALQWVYQKFKFKF
ILKTDDDTFIHVDRVMHILQHGWSNEHFIGHAMRGQPPERNKGRYGVSLK
EWPHKTYDAYCSGGGYFLSQSIIGRMIPHFDWETPLKIDDAYIGHLVKKA
GGRPLHAPQHFLMWNDHCTYTPTFLVSHPAKTSGCRDFFMSKAFLEMGKT
KQHKYENETSFFSYQQKMKKKRNKN

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_040738	XLOC_040738	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00064976	TCONS_00064976	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002659	Glyco_trans_31
IPR029044	Nucleotide-diphossugar_trans

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0008378	galactosyltransferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006486	protein glycosylation

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006486	protein glycosylation
cellular_component	GO:0016020	membrane
molecular_function	GO:0008378	galactosyltransferase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002659	Glycosyl transferase, family 31	PFAM	PF01762	Galactosyl_T	coord: 18..201 e-value: 2.8E-34 score: 118.6
IPR029044	Nucleotide-diphospho-sugar transferases	SUPERFAMILY	53448	Nucleotide-diphospho-sugar transferases	coord: 55..217

Blast

[Close]

BLAST of TCONS_00064976-protein vs. Swiss-Prot (Human)
Match: B3GN4 (N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4 OS=Homo sapiens GN=B3GNT4 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 6.455e-25
Identity = 63/205 (30.73%), Postives = 102/205 (49.76%), Query Frame = 0

Query:    6 VIFLVTSFAKHFERRTWIRSSWGLGTTWLNKKNWKVIFNVGSMKHDAAVISAQLQKEAERYKDLLILDVPEDFHKLSLKVMVALQWVYQKF-KFKFILKTDDDTFIHVDRVMHILQHGW--SNEHFIGHAMRGQPPERN-KGRYGVSLKEWPHKTYDAYCSGGGYFLSQSIIGRMIPHFDWETPLKIDDAYIGHLVKKAGGRPLH 206
            ++  + S   H ERR  IRS+WG    W   +  K++F +G     +A  +  L  E+  + D+L  D  EDF  L+LK +   +WV     +  F+LK DDD F+HV  V+  L  GW  + +  +G  +R   P RN K +Y +    +    Y  Y  GGGY +S++ + R+    +      IDD ++G  +++ G  P+H
Sbjct:  120 LLLAIKSQPGHVERRAAIRSTWGRVGGWARGRQLKLVFLLGVA--GSAPPAQLLAYESREFDDILQWDFTEDFFNLTLKELHLQRWVVAACPQAHFMLKGDDDVFVHVPNVLEFLD-GWDPAQDLLVGDVIRQALPNRNTKVKYFIPPSMYRATHYPPYAGGGGYVMSRATVRRLQAIMEDAELFPIDDVFVGMCLRRLGLSPMH 321

The following BLAST results are available for this feature:

BLAST of TCONS_00064976-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00064976-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
B3GN4	6.455e-25	30.73	N-acetyllactosaminide beta-1,3-N-acetylglucosaminy...	[more]

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TCONS_00064976-protein (polypeptide) - C. hemisphaerica