TCONS_00065038-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065038-protein
Unique NameTCONS_00065038-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length444

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065038-protein ID=TCONS_00065038-protein|Name=TCONS_00065038-protein|organism=Clytia hemisphaerica|type=polypeptide|length=444bp
MSMLAEPRSRQKWSEDPRNTRWSSDKSKFGYQMLTKMGWSEGLGLGSTLQ
GHTSHVKIKKKKNGHGIGMKTSHDDDWIAHQDSFNALLSSLNTGDAPSDK
KIQSLEDRVRVTRTKIMYSRFVKSKDLSRASNNDLACIFGQRSKSAPSTP
QRSEDEDGSLSDGSTASCPTQKRAKDAKAGKSTTEHGFTTISSGVSVADY
FASKMAALKQGSKTSLASTTDRVPDQENTDSKGTEETESVPKKKKKHKNV
TFDITENSSTDESEQIKQEEEEECTETKKSKKKKHKKSQKSSDIVEEETS
QEENVDVKKKKKKKKARLEEGTDEQQYVVCREKKEKSKDRVEESTTNQNS
DEQSSSNSESPQPSKSKKSKKKKNSRNVEEVENESKNIVDDETMTSSSSS
SKKSKKKKRRHEESEEVSHENDGGEERKKKRKKRHQSDGEDGAN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040775XLOC_040775Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065038TCONS_00065038Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000467G_patch_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000467G-patch domainSMARTSM00443G-patch_5coord: 24..70
e-value: 2.0E-10
score: 50.6
IPR000467G-patch domainPFAMPF01585G-patchcoord: 27..70
e-value: 5.5E-12
score: 45.3
IPR000467G-patch domainPROSITEPS50174G_PATCHcoord: 26..72
score: 13.519
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..444
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..188

Blast
[Close]
BLAST of TCONS_00065038-protein vs. Swiss-Prot (Human)
Match: PINX1 (PIN2/TERF1-interacting telomerase inhibitor 1 OS=Homo sapiens GN=PINX1 PE=1 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.910e-41
Identity = 109/347 (31.41%), Postives = 164/347 (47.26%), Query Frame = 0 
Query:    1 MSMLAEPRSRQKWSEDPRNTRWSSDKSKFGYQMLTKMGWSEGLGLGSTLQGHTSHVKIKKKKNGHGIGMKTSHDDDWIAHQDSFNALLSSLNT--GDAPSD------KKIQSLEDRVRVTRTKIMYSRFVKSKDLSRASNNDLACIFGQRSKSAPSTPQRSEDEDGSLSDGSTASCPTQKRAKDAKAGKSTTEHGFTTISSGVSVADYFASKMAALKQ-------GSKTSLASTTDRVPDQENTDSKGTEETESVPKKKKKH-------KNVTFDITENSSTDESEQIKQEEEEECTETKKSKKKKHKKSQKSSDI------------------VEEETSQEENVDV 307
            MSMLAE R +QKW+ DP+NT WS+D SKFG +ML KMGWS+G GLG+  QG T H+K++ K N  G+G   +++D+WIAHQD FN LL+ LNT  G   +D      KK  SLE++ ++++ ++ Y +F K KDLS  S  DL CIFG+R                             K+  +  A  ST E   TT +S  ++ +YFA +MAALK        GS  S      +   + N ++ G +    +  K K+H             + +  S    EQ++    ++ ++        H +  +  D                   + E+ + EE +  
Sbjct:    1 MSMLAERRRKQKWAVDPQNTAWSNDDSKFGQRMLEKMGWSKGKGLGAQEQGATDHIKVQVKNNHLGLGATINNEDNWIAHQDDFNQLLAELNTCHGQETTDSSDKKEKKSFSLEEKSKISKNRVHYMKFTKGKDLSSRSKTDLDCIFGKRQ---------------------------SKKTPEGDASPSTPEENETTTTSAFTIQEYFAKRMAALKNKPQVPVPGSDISETQVERKRGKKRNKEATGKDVESYLQPKAKRHTEGKPERAEAQERVAKKKSAPAEEQLRGPCWDQSSKASAQDAGDHVQPPEGRDFTLKPKKRRGKKKLQKPVEIAEDATLEETLVK 320
The following BLAST results are available for this feature:
BLAST of TCONS_00065038-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PINX11.910e-4131.41PIN2/TERF1-interacting telomerase inhibitor 1 OS=H... [more]
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