TCONS_00065292-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065292-protein
Unique NameTCONS_00065292-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length373

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065292-protein ID=TCONS_00065292-protein|Name=TCONS_00065292-protein|organism=Clytia hemisphaerica|type=polypeptide|length=373bp
SEMITGVDLVELQLRAAAGERLPFTQEDLEIKGHSFEARIYAEDPDSDFL
PGTGKLHYLSTPLPSSDVRIETGVRQGDEVSQYYDPMIAKLVVWDEDRAT
ALKKLYRKLSEYHVVGLSTNLKFLKDLASHPAFVTADVHTDFIQEHNDEL
FPKRGGLNGHQLAQAGFALILDEQNTLAQKSRLSDTHSPMNNFSSYRVNV
NEHQSIQIKDGDQDLTLDVTYSDGHVSIKVGDEEFVCSGNLETSENQTIA
NVTINGQRERYSFVTHDGGLHVFTKDTHFQVQKQRPKFVLETIEAALPQG
GIIAPMTGTIMEVRAKVGEEVKAGDTVAVIYAMKLEHNIVAPHDGVVEEV
FVDASQMVNQNDEVLKIKEHGDE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_040935XLOC_040935Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065292TCONS_00065292Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005482Biotin_COase_C
IPR000089Biotin_lipoyl
IPR001882Biotin_BS
IPR011764Biotin_carboxylation_dom
IPR011054Rudment_hybrid_motif
IPR011053Single_hybrid_motif
Vocabulary: Molecular Function
TermDefinition
GO:0004075biotin carboxylase activity
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
molecular_function GO:0004075 biotin carboxylase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005482Biotin carboxylase, C-terminalSMARTSM00878Biotin_carb_C_2coord: 37..144
e-value: 2.8E-52
score: 189.7
IPR005482Biotin carboxylase, C-terminalPFAMPF02785Biotin_carb_Ccoord: 37..144
e-value: 1.3E-37
score: 128.1
NoneNo IPR availableGENE3D3.30.470.20coord: 1..153
e-value: 1.9E-51
score: 174.4
NoneNo IPR availableGENE3D2.40.50.100coord: 292..371
e-value: 3.3E-18
score: 64.6
NoneNo IPR availableCDDcd06850biotinyl_domaincoord: 302..367
e-value: 1.08218E-22
score: 89.0123
IPR000089Biotin/lipoyl attachmentPFAMPF00364Biotin_lipoylcoord: 302..367
e-value: 1.2E-14
score: 53.7
IPR000089Biotin/lipoyl attachmentPROSITEPS50968BIOTINYL_LIPOYLcoord: 292..368
score: 22.643
IPR001882Biotin-binding sitePROSITEPS00188BIOTINcoord: 324..341
IPR011764Biotin carboxylation domainPROSITEPS50979BCcoord: 1..148
score: 26.616
IPR011054Rudiment single hybrid motifSUPERFAMILY51246Rudiment single hybrid motifcoord: 32..150
IPR011053Single hybrid motifSUPERFAMILY51230Single hybrid motifcoord: 299..367

Blast
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BLAST of TCONS_00065292-protein vs. Swiss-Prot (Human)
Match: MCCA (Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Homo sapiens GN=MCCC1 PE=1 SV=3)

HSP 1 Score: 315.464 bits (807), Expect = 1.792e-101
Identity = 160/373 (42.90%), Postives = 240/373 (64.34%), Query Frame = 0 
Query:    1 SEMITGVDLVELQLRAAAGERLPFTQEDLEIKGHSFEARIYAEDPDSDFLPGTGKLHYLSTPLPSSDVRIETGVRQGDEVSQYYDPMIAKLVVWDEDRATALKKLYRKLSEYHVVGLSTNLKFLKDLASHPAFVTADVHTDFIQEHNDELFPKRGGLNGHQLAQAGFALILDEQ---NTLAQKSRLSDTHSPMNNFSSYRVNVNEHQSIQIKDGDQDLTLDVTYS-DGHVSIKVGDEEFVCSGNLETSENQTIANVTINGQRERYSFVTHDGGLHVFTKDTHFQVQKQRPKFVLETIEAALPQGGIIAPMTGTIMEVRAKVGEEVKAGDTVAVIYAMKLEHNIVAPHDGVVEEVFVDASQMVNQNDEVLKIKE 369
            +EMITG DLVE QLR AAGE++P +QE++ ++GH+FEARIYAEDP ++F+P  G L +LSTP      RIETGVRQGDEVS +YDPMIAKLVVW  DR  AL KL   L +Y++VGL TN+ FL +L+ HP F   +VHTDFI +H+ +L   R       L QA   LIL E+   +T   ++   D  SP ++ S  R+N++  +++ +KDG  ++ + VTY+ DG  S+++ D+ F   GNL +  + T    ++NG   +   +  +  +++F+K+   ++    PK+ L ++ +   QGG +APMTGTI +V  K G++VKAGD++ V+ AMK+EH I +P DG V++VF       N++  +++ +E
Sbjct:  347 TEMITGTDLVEWQLRIAAGEKIPLSQEEITLQGHAFEARIYAEDPSNNFMPVAGPLVHLSTPRADPSTRIETGVRQGDEVSVHYDPMIAKLVVWAADRQAALTKLRYSLRQYNIVGLHTNIDFLLNLSGHPEFEAGNVHTDFIPQHHKQLLLSRKAAAKESLCQAALGLILKEKAMTDTFTLQAH--DQFSPFSSSSGRRLNISYTRNMTLKDGKNNVAIAVTYNHDGSYSMQIEDKTFQVLGNLYSEGDCTYLKCSVNGVASKAKLIILENTIYLFSKEGSIEIDIPVPKY-LSSVSSQETQGGPLAPMTGTIEKVFVKAGDKVKAGDSLMVMIAMKMEHTIKSPKDGTVKKVFYREGAQANRHTPLVEFEE 716
The following BLAST results are available for this feature:
BLAST of TCONS_00065292-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MCCA1.792e-10142.90Methylcrotonoyl-CoA carboxylase subunit alpha, mit... [more]
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