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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00065324-protein ID=TCONS_00065324-protein|Name=TCONS_00065324-protein|organism=Clytia hemisphaerica|type=polypeptide|length=3745bp
MEVDVNASNFMKDILPYLDELDDVIVTDVNGERILYPCCPPKKTEYGWYC
KERTTTDDIGRRKKSGTGENVVYFVDANERINLVRNTLERFALVLPMGGS
HYISVIVHHFTNTIYILHSHQSHNENVKERALNHLVNVDEYDIRDIVFRQ
KEDTRISICYAYVRAKLALQSSINISLLPGMCEDIDILKEKNLYKMASLV
FMIHNKNDPQEQMEENKEMIEEFITRSVNDTKLHLDEVLSKIEKYFDSNV
LTNSEKNFIREEYTTSVLEMFLRHLQQGIESVNVNSIKKWRRKSFGVNKQ
MMITFQDVKGIQLIKHCWSGKIFSKKNEADLLTRLSLICELHLSKFITSL
QQDCQRFLLKFQNFLKEQYDYKLGEMYEVQINSRGLREGCLYSWLSNNAQ
STLEIDEMDFVKSMDAAEGTETSEWFIQQMYHHIHLFNTQIKCDLTERHL
SIVKEYIGISEVVTAIQSFDGQYDELVVVSSCYLVVDANLVLPGINLIIL
ADEIKVQDYDASKSSFRFDLSGADGVDKWDGKKAKEGKDYGDDGSAGGNG
ENGQSGGNVYIKTNSLVNGESLRIISNGGNGSNGQDGGDGKNGRQGEDGS
GLTKACFEREFPSIARYAGYKSGNARREIDKRLKQTTTKHSTFRGLNFHT
EGKIEIDENDHEIIVCLYFWLPNRYSYLMVKGNPGTKGTSGGDGGQCGLQ
GSGGYAGKIDISWPNKKKKGWPKEEATRGGDGTAGKDGRGGKGGRNGIHG
PDNLRIEMTSKQDIIYYHGNLLIKYSTNATNESVYCCYHEKYASCEIHET
PTHSYESDGIKGKIKRREKQQQVRRNAPVDKEQMAQLHQEIIKERNEEMD
FFDQSFDSSFVGEWNVNVVHQEDKNILANFQSDAAFTNLHPGKNKLQKIK
STTRKNSSKGTAKDVTEQINEFMKLSVDKYPSIPVVIKTVVDSQNNSTSS
IEFVTYLEQIFECAEFLECTDNFLRDFFVNVKGNVFNIDNNDVIECFNFI
NHFKEEDQESFFNVKEEESRFSVRPIFSKKDETTRNKDVLHQRGLLYHLD
DILETLFQREKLITIRQTREKLDKMIIKWLKRWMKESKKHDKLIDKKIRN
SYCQLLSRMMDTNMDDVDDCDLDVQQQQVLFEFNEVLDETDEMYKVLTNT
KLAGFFERFHRDQEKERSENDGDTVDDVEFQEPREVAENSNHSDRTIEQS
DQYSDEGIETSNDLAIFKQIEQLCMDLEKVNGVTSTLATYIQQLQFLKIN
QCDVLILLKALLYRLKNGELVGNQETIKWFILFTFDYVDVYDINDILLLV
YAHPVKAWAREILTLQLQNRLDMSLLEEFQFKCNTLRPITNQPAMIWVNQ
RLQDQGEDEKVTCEDIDTILKLCEDIEIDQELKHRMQNNTLSTWPNHLQW
LAMVKHLEKLNVVWKNDSQELNALYHLTELRNTYGHQLPDMMINLLSTFS
NIGCYALLRMLQNFVNGYWILDKDVFEEKSTSFHQWMDFLTDKFDTFKDK
ERSLDDLTELIKNDTNTSMNKDYLDIAKRNVLEWDQLDLQVSNQPRMQQA
SMKPVLGKRFNKSGDLKTGLHAMSEAFLELSFNKQYRRSSYSNKTPDIKR
LAEINMAVKEIYDFELRYTQKLAVMLFLISEKHHKGMLQQLSTGEGKSII
IAVLSIYYALSGQNVDIITSSPVLAKRDAKENERLYSLFNISVGHNCDES
LEQRKNVYAKKQVIYGEIGAFQRDILLDEFYDQEVGVGSRKNGIVIVDEV
DSMLLDKGQNVLYLSHNIPGLENLEDLYVSIWNFVHAECVIGSEEDIQQI
MECIRSSMNERILVKNVEKIVGKDCVEEIWNLLIRRNVIKEDGSIIDVDQ
LKSGHLEDNKIQIVSELTKEQKVMLIKQMKDVVRRGTDLYIPSYLKDFVD
LHLHDWVSNAFSARFMAQNDHYIIDVDRSEGKNTFHDNNIIIIDKDTGME
QYNSQWSQGLHQFLQLKHCCRISFESLKAVFMSNVSFFRKYNDKIFGLTG
TLGSEVDRDLLKEIYSVEYATIPSFKPSKFKEYPSMAFTNEDQWLDSIER
SMLEKKLQQRPVLIICDSVKYADKISKHLLKKTPELEVYKHSYENFKSNE
TEITACKIMVATNLAGRGTDLKIGQNMSNKGGLHVIISYMPKNLRVEQQA
FGRAARKGQNGSGEIICLSEQCDQVDGESDISCILRAIDMKIDRQEEEGV
RVSSIKRKYENVTQHEEKHFEKFTKAYRGLKRHLNTTKTIENEEKTIVLQ
SCLDNWAFWLDEIVSKGSNQDEKSLGQAIKYAKIDQFLRPMQNRTASYEH
LIKNPAGRIKLAQHLLSKKKYDDAECILNNLIERDRHFSEIALYYKCYGD
ICKNGREEWVKVKENLKEVLRMVEEKIERISSNSAIITAISKVYQNQKFT
FLKCEGYKEQKQQVIQVFNTMITSIIDILGHEATAMKFSTELSIEFPQAL
KLFQLLKNNDILSSAVIKQLPHGQYKKLLQEKYALYYKDIENFISTKLYP
SKFDLLACFNANCRGYVPFDVRDLKQVLPSSEEFWDVMSDANIISNIKEY
ALVEPSQLKEKDGGWVEIPRDVRSRMELEHQRLFQEPKQSKNVIFMHENL
KEQMSDGSLLMVPVDVFYDEKFDFVDRKELLEQAGIKITRTAILMEDCYL
NRMKKYDNLHHSSFTIINGFTRQMSNEVFEDLVQNQVVERHTGDLLVPTI
DRSIVKLTKHIEYEAEVMGVLEKNFQYRLALNTIKSGGRVLLEDSPHLLL
EGDLESFGIIEKCKVHPSTDFESIIKNHYKVDLTSEAKDYATDSLLYALN
VPKNEELKKIKQKKKQLTHSLISCIDGWKASVDKLEDIDGGLIEITSMFP
EDVKYQMKNDLSVILNSGFTHTIKLGERKRTFWFKARIAAIILLALVQIV
VAIVIEVCSAGAMTFVASGFMSEGVSDLMFAIEAAATGYCTWKAYKMHKI
FSVAVTVVSCGLGAYWAKGAKCNKYGFKLSGEYYKHLSGEALLKEFTNQK
ILKAAGCRIGKKVLEAIALSLTNVAIDRLVKDAVMSATKNVINTCISDVE
KEVDGNKRLKNVVNALCKKVGPERAGQIIEQTNSMMKEEEQNGIHQLIIK
FATIAASGVARGFGQAAKKLSISGGSNAKAIGQISTIIGKVMKHAGTAKS
LLAIKNQASNYIEKLGSKIEERLQYELETASPELKEQQIKDFQFRTCKQI
KAELTNEINQILWHELLRPAIQSTAHNAVHSFGKFIQNQYQNYQEGLLQK
DLETIVQQNKKRKLREGIIEEESESAYNKEEIDQMIKILEKTRSPQMYEV
LIKAGVPMGVHCAQATADLLNRQIVVEMSNGSPPLVLNPKDGGGGGPPIN
LNLNMNGDDSVGHYQVQGSTNVSEGGDYNCFLRAAEEASGQKISRDDIAN
HIVNDPRICQYIEMGIHEHFLTRGKFGGVSRTNEQDMEEMVEKLRDTHPY
NFDKEYNKHKQKFLDKAKYQHEGKKGKKSGNDEIWQRKKIREAHQKVWER
NNPQNDSNKRVKLNNRDTQTFDELDIALWLRVDTQSVIFDPSKLSKNEDD
PKIGGHTGALFKNNNTDNTGGLTNGQSNFHEQRHSKMTDPDGRASDHDLT
PPQQCAVRGLEAHLNLTLSSDALLNKTDFGGHSKVITTTGHDLVDPKDRQ
QWVNNGYRDERAKIFLVGQSLNGGRDLNIQDKALIDYANDLNASPYIKNV
RNQLKKISDKHNENFASRKAFQSASRILMKPAPNRHKEHRRTKDK Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0017038 | protein import |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0017038 |
protein import |
| cellular_component |
GO:0016020 |
membrane |
| molecular_function |
GO:0005524 |
ATP binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 2356..2383 |
| None | No IPR available | GENE3D | 3.90.1440.10 | | coord: 1834..1975
e-value: 2.5E-13
score: 49.8 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 1601..1771
e-value: 6.0E-8
score: 31.8 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 2027..2243
e-value: 1.2E-18
score: 66.9 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 717..753 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 531..559 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 3715..3745 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 803..833 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 3556..3598 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1163..1205 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 577..601 |
| None | No IPR available | CDD | cd00079 | HELICc | coord: 2045..2161
e-value: 1.34637E-8
score: 54.9365 |
| IPR011115 | SecA DEAD-like, N-terminal | SMART | SM00957 | SecA_DEAD_2 | coord: 1587..2008
e-value: 4.6E-6
score: -233.6 |
| IPR011115 | SecA DEAD-like, N-terminal | PFAM | PF07517 | SecA_DEAD | coord: 1597..2004
e-value: 2.2E-30
score: 105.8 |
| IPR011130 | SecA preprotein, cross-linking domain | PFAM | PF01043 | SecA_PP_bind | coord: 1869..1964
e-value: 8.6E-6
score: 26.3 |
| IPR011130 | SecA preprotein, cross-linking domain | SUPERFAMILY | 81767 | Pre-protein crosslinking domain of SecA | coord: 1894..1973 |
| IPR014018 | SecA motor DEAD | PROSITE | PS51196 | SECA_MOTOR_DEAD | coord: 1509..2197
score: 35.626 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 1975..2023
coord: 1575..1767 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 2038..2170 |
Blast
The following BLAST results are available for this feature:
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