TCONS_00066209-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066209-protein
Unique NameTCONS_00066209-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length188

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066209-protein ID=TCONS_00066209-protein|Name=TCONS_00066209-protein|organism=Clytia hemisphaerica|type=polypeptide|length=188bp
MSEGKQSQFRREEEEIAKGARAMEDPKRCTICLQPKTPNSSSNKCDQCLD
KINKVPTGFAFRAVEGQGDKEFECPICLCLIKGATELPCEHLMCGKCLLH
YENGQTEKAEKEEPQKNPEFLCSVCMTPYKVQDKKSVKSTDRFIQNTIRV
HCMQKDCPWIGSIKDYEVHVKKCDYGKIKCPYFELGCL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041432XLOC_041432Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066209TCONS_00066209Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR018957Znf_C3HC4_RING-type
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 74..125
e-value: 0.0013
score: 28.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 74..125
score: 8.772
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 74..104
e-value: 3.8E-6
score: 26.6
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 142..188
e-value: 7.7E-10
score: 38.3
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 66..139
e-value: 2.0E-9
score: 36.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 67..144
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 89..98

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066209-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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