TCONS_00066282-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066282-protein
Unique NameTCONS_00066282-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length284

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066282-protein ID=TCONS_00066282-protein|Name=TCONS_00066282-protein|organism=Clytia hemisphaerica|type=polypeptide|length=284bp
MARSAEKAMAILSRWTAMMNAEDKPQVATRRPFLATECNNLKEAEKWRHQ
IIREISKKVSQIQNAGMGEFRIRDLNDEINKLLREKRHWEERIVQLEGPN
YAKVGPRMLDHEGKELPGNRGYKYFGAAKDLPGVRELFEQEPPKAPRKTR
GELYKNIDADYYGYRDDDDGILAPLEMELEQRNRKEEITEWEKKRDRGEI
KVPDDADENIYTSEKFDFGENESDGEGEEESGNRDKRFVSHVPVPTQKDV
EDMLIQRKKQELMERYASELLQKQSSTAKTLMGV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041484XLOC_041484Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066282TCONS_00066282Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009360Isy1
Vocabulary: Biological Process
TermDefinition
GO:0000350generation of catalytic spliceosome for second transesterification step
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000350 generation of catalytic spliceosome for second transesterification step
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 72..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..252
NoneNo IPR availableSUPERFAMILY140102ISY1 domain-likecoord: 29..103
IPR009360Pre-mRNA-splicing factor Isy1PFAMPF06246Isy1coord: 1..265
e-value: 1.2E-94
score: 316.6

Blast
[Close]
BLAST of TCONS_00066282-protein vs. Swiss-Prot (Human)
Match: ISY1 (Pre-mRNA-splicing factor ISY1 homolog OS=Homo sapiens GN=ISY1 PE=1 SV=3)

HSP 1 Score: 331.257 bits (848), Expect = 1.193e-114
Identity = 173/289 (59.86%), Postives = 218/289 (75.43%), Query Frame = 0 
Query:    1 MARSAEKAMAILSRWTAMMNAEDKPQVATRRPFLATECNNLKEAEKWRHQIIREISKKVSQIQNAGMGEFRIRDLNDEINKLLREKRHWEERIVQLEGPNYAKVGPRMLDHEGKELPGNRGYKYFGAAKDLPGVRELFEQEPPKAPRKTRGELYKNIDADYYGYRDDDDGILAPLEMELEQRNRKEEITEWEKKRD----RGEIKVPDDADENIYTSEKFDFGENESDGEGEEESGNRD--KRFVSHVPVPTQKDVEDMLIQRKKQELMERYASELLQKQSSTAKTLMG 283
            MAR+AEKAM  L+R+      E K  V  RRPFLA+EC  L +AEKWR QII EISKKV+QIQNAG+GEFRIRDLNDEINKLLREK HWE RI +L GP+Y KVGP+MLDHEGKE+PGNRGYKYFGAAKDLPGVRELFE+EP   PRKTR EL K ID +YYGY D+DDG++ PLE E E++ R E + +W+ +R+    RGE +  ++ +E I     +   E ESD EG +E G  D  ++F++HVPVP+Q+++E+ L++RKK EL+++YASE LQ QS  A+ L+G
Sbjct:    1 MARNAEKAMTALARFRQAQLEEGK--VKERRPFLASECTELPKAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYYGYLDEDDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINI---YAVTEEESDEEGSQEKGGDDSQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEARRLLG 284
The following BLAST results are available for this feature:
BLAST of TCONS_00066282-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ISY11.193e-11459.86Pre-mRNA-splicing factor ISY1 homolog OS=Homo sapi... [more]
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