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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00066336-protein ID=TCONS_00066336-protein|Name=TCONS_00066336-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1027bp
MTEKFDCERCEKASWRMMGSELESCENCLWQNHANLMKKRWREECQRKSF
NSAMMAEELHSFNEKLVNSKEDFILDGLAKFDKDVECSDSDIDYIPPTDV
SESDESDYETPSISDGRKRKRKEKAFAPEMKKKIEEKTFEKTVQAIDDLS
SKLFSLQKDQHEEAIVIIEEFSHLKFSKAMLSTTKHGKKLVQHIKQLKKE
DNEELRCCAANLLERLRSIVLTKGTVQNETQEPSAKMQKVVSTSEEKNST
SGPSAKMKNASTSKEKTSTSGGDKGKIQKKENSSPSVSETKETTEEKLEK
YFQTKNAVVPLGKPGVYRFKCVFEECKSEIQDLKCHLMTVEHKDYPLWDA
KKAGLEQSIRISMYKWLSKPGYSGVYRPKVCTVHGVCLNRMDMHAKMFHE
GNNKANTDLDPKITFVPRDTGPTLEEYDSSEDNEFPKHFGEEALPDPFKK
PLVYARRITSRERRQKSISIDFKFTYTCGIELLKDFARYLITQGKTHATA
IQIANRVQYVWETMDPTYSISNNVFKKKEELEDGYFLALFNQILLNSNKA
VTKERTHEQATTVGARLLAVGQFFNFLILRDIYVDLSLHQIERTRLKQKE
LLGRLQPYVLIRQKAVYRWKQKHLLSMDDFIDIGNSKHAVAVGNLLDNPG
EVCKSISVTDLRNLLIFLIVMINAARSSNISEMTLEQLNNAVESDEYISN
LPGMVVRSDLYKTSHIYGEKLLLLPKDVFRQIQNYVKYFRPTLINDDEKP
DNERYLFTSSRIKKGDSGKMTTSNVASACSKVYEKSGIGGELTRCSPTRI
RHAAATELAGHDGEKAEVVAKMFMKNRTETTQKFYIVNYNQRESVRLSMK
MYEKTRGSNFKPENVPRPKEVTKDEELKWLKRTQAKIKAKFHNDVEDIEL
LKSITSEPEDIEQVFEAALDESATTATEGPPVKHSDSNIDFNMSSSSKAS
KAVENGDDHNDNEKDSGVKDCDGSSEKLEVNVGANEDVGSNEDNIGANGS
ETIKSKPGSIESTCPTDNVSAEDIIHT Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006310 | DNA recombination |
| GO:0015074 | DNA integration |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0015074 |
DNA integration |
| biological_process |
GO:0006310 |
DNA recombination |
| molecular_function |
GO:0003677 |
DNA binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002104 | Integrase, catalytic domain | PFAM | PF00589 | Phage_integrase | coord: 658..835
e-value: 5.4E-5
score: 23.0 |
| IPR013762 | Integrase-like, catalytic domain | GENE3D | 1.10.443.10 | | coord: 642..847
e-value: 5.5E-11
score: 42.1 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 922..1027 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 94..125 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 227..295 |
| None | No IPR available | CDD | cd00397 | DNA_BRE_C | coord: 651..822
e-value: 1.96279E-5
score: 43.6227 |
| IPR011010 | DNA breaking-rejoining enzyme, catalytic core | SUPERFAMILY | 56349 | DNA breaking-rejoining enzymes | coord: 653..836 |
Blast
The following BLAST results are available for this feature:
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