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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00066341-protein ID=TCONS_00066341-protein|Name=TCONS_00066341-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1407bp
KECGALYSIPELQLRKTCNACYLKRLCDVLADVTIKQVAKKNNMGSQLLK
GPNDMRMVNCIKKAIVDKRKELSNGGPNSDDKDQEDFEDDKDSEEDEESE
EDEESDGESDGDEDFDPKRHQKRKKVVLSSKVSESKVKHKRKEGKKKEKK
RKKTQPKSPDWKNIHYYPDIDDFSVDLSEFDVDDSILKAKQSRIREDLMS
AFGELNTIKNPMEMIKEVTCPFKSCTFKGVNLKDHLTRKSTHNWPTNMAI
LEQSYRKRQFSHLTKMQKFKSMEPAPCCECGYFFERLDSHVASKAHNIKR
HSSQYKKFMMECNLAYESFRSFRNSFQNLKHAREQQSLFREEIPSTSRSS
FPLNSQCELQSSSATCSSSFTSRELQSSSATCSSFTSQKTRSSRPSRSAS
ASFKRQHSDESSDDDSDDGNNGKKKILKKASSHKMVTASYKIFKLTDKID
MTKNHHEDIGTDPLTQQYLFLNADALLHNFLNWMCLCRRMKETNAKEILS
HVKHVWKTIDVNLTCGFKTLLTGENVSDVFFNPLVAEMEIEMKKPLDCQK
QNFYKPTTLSTKTGAVILFLDFVEERRIYFGLKLAEIKIFRKQMKTNQKG
LNKSTKQRQQDVQDNKLDHLLQIKDFAAYGNSNYVKEIVNRLSDRNSFFT
LREAFAARNMLFVFLCYTNGVRASNLMTMTLRDFKKADWDLEFKAYVLKN
KRYKTSLLYGQKIIVLSANLYQMFNTYIKRCRKYFVTDEDKRSYERPMFP
SSQTGLPLPHPAICKAMSKSFEEADSLKGTKLDERISPTRIRISIATEFS
ANEGVDYDRFAELFMKHRATTSKKFYVTRFNHREAIQMSLKCYEVFGIDK
TLQTEAKKFAKSIKTTSSNAGKLKDWLKKNITMIKEETGEDACDEEIVEE
LRSLLGSMDGEKSNIGQEDAVGVDINTCTESSNGIEESDTTHDIKRSSEE
TSGIEESDSTHDTKRSSEETSGIEKSDTTHDIKRSSEETSGIEKSDTTHD
IKRSSEETSGDMEIDDDGNGSINFSIEFDINNLKDSSESTIISEILDELI
DKVSNISPLNDAKTKEVTTVKEETKLKDFKVVLKDVQHKTTSGKTFRENI
EIKENSDKSKKVLSKDGEVIFLKDTFQEEEVPRRQLKEVYNKMKRLTSKD
VDNFYTTFRKHLSSLVGGGCASARYEVLFGTKQHFDYEGKQITVHLLNHY
QNTGFLKDDLYEHFEKAVDELFPSKNSLDLHRKFNLLIPVSLIWLTQFET
NLSAEQAAYFLSHHYEGATNTQSEDEAEEEKEEESINENKMDKDKTLSFR
RDFSLEDWHQTTKLTREQLLILVFVIKDLIRQGKYIKKSLFEDTLRVATT
TYPRARQLCDLTWNAHFKDVITSMTRKFIKEKRTKDTSKFEEFVLEARRL
YNYDLKH Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006310 | DNA recombination |
| GO:0015074 | DNA integration |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0015074 |
DNA integration |
| biological_process |
GO:0006310 |
DNA recombination |
| molecular_function |
GO:0003677 |
DNA binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR013762 | Integrase-like, catalytic domain | GENE3D | 1.10.443.10 | | coord: 631..833
e-value: 3.2E-11
score: 42.9 |
| IPR002104 | Integrase, catalytic domain | PFAM | PF00589 | Phage_integrase | coord: 654..827
e-value: 2.0E-5
score: 24.3 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 383..430 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1269..1291 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 69..162 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 929..1018 |
| None | No IPR available | CDD | cd00397 | DNA_BRE_C | coord: 647..806
e-value: 6.32943E-4
score: 39.7707 |
| IPR011010 | DNA breaking-rejoining enzyme, catalytic core | SUPERFAMILY | 56349 | DNA breaking-rejoining enzymes | coord: 654..822 |
Blast
The following BLAST results are available for this feature:
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