TCONS_00066559-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066559-protein
Unique NameTCONS_00066559-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length660

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066559-protein ID=TCONS_00066559-protein|Name=TCONS_00066559-protein|organism=Clytia hemisphaerica|type=polypeptide|length=660bp
MEIDGGLKGSMVKITNRAKRRLIKRKSNVNAKKLVFDAVHKKDVSLKEKQ
EILWAASECDREDILEELLQDTQIDINLTDENGHSAIFHAVINGSTDCFN
TLLSKNADVQLSDTTGRNVLTHAVENNHHSIVSKVLKVVTPNLIDDTVEH
LISTRSSKLLCNFANYEEVDLSKFAGVTGFHDKKRQYSALHYACKKGYIT
SAEKLIKNGTRLTNRNAKETPLLLAYSQKNLEIISMLLNHGVVLSNNMFI
SSKTILEVDFVKFTEIHYSYGHGEFCCESYDYDECKDGGHCCKDVCQHYF
KFCVQPITNDVSDESCVTTGVLTPNETYTMLKDRVNTPNPWQIVLEKPIE
QFNFNLEVYDKNVLSSYLLYESRSLIDIDTTTVARTSSKWIERSYNKTNR
GEYLFHFRSYCAPNYYNQTCDVYCKAQHESSGSYRCNNETGAIICLDGWS
GKNCDKGMSAPELSIQSITSNQTDFESGTAITLKCTSVSNPSPSYYWFRD
GTPVSNRNTTGFLVLTNATVDNSGSYTCVSRSRLAKMTSISIDLHIWEIH
KPTITSSKTLLNNGFINYQSNVNLTCSNNGNAPGLVQFQWIDLGNNNDVI
SNQSTLSISADERDSVFEFGCQSTQKHIVLNSDPLKFKVTWLDEPQLSIS
QSAYNXTFRA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041631XLOC_041631Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066559TCONS_00066559Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003599Ig_sub
IPR002110Ankyrin_rpt
IPR003598Ig_sub2
IPR001774DSL
IPR007110Ig-like_dom
IPR020683Ankyrin_rpt-contain_dom
IPR013783Ig-like_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007154cell communication
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007154 cell communication
cellular_component GO:0016020 membrane
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 470..547
e-value: 1.3E-4
score: 31.3
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 217..246
e-value: 0.77
score: 18.8
coord: 48..78
e-value: 320.0
score: 8.6
coord: 82..111
e-value: 0.042
score: 23.0
coord: 115..143
e-value: 180.0
score: 10.5
coord: 185..214
e-value: 0.49
score: 19.4
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 185..217
score: 9.003
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 82..114
score: 9.484
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 476..535
e-value: 7.2E-9
score: 45.5
IPR001774Delta/Serrate/lag-2 (DSL) proteinSMARTSM00051dsl11coord: 390..454
e-value: 4.9E-9
score: 46.0
IPR001774Delta/Serrate/lag-2 (DSL) proteinPFAMPF01414DSLcoord: 390..454
e-value: 2.7E-13
score: 49.7
IPR001774Delta/Serrate/lag-2 (DSL) proteinPROSITEPS51051DSLcoord: 409..454
score: 11.377
IPR007110Immunoglobulin-like domainPFAMPF13895Ig_2coord: 468..532
e-value: 1.5E-11
score: 44.3
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 461..541
score: 13.82
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 552..640
score: 8.738
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 470..547
NoneNo IPR availableGENE3D2.10.25.10coord: 276..455
e-value: 4.2E-4
score: 20.0
NoneNo IPR availableGENE3D2.60.40.1290coord: 542..630
e-value: 0.0078
score: 15.5
NoneNo IPR availableCDDcd00096Igcoord: 481..539
e-value: 3.57219E-7
score: 47.0987
NoneNo IPR availableCDDcd00204ANKcoord: 77..238
e-value: 1.2885E-18
score: 81.661
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 183..242
e-value: 4.3E-7
score: 30.3
coord: 54..136
e-value: 1.6E-8
score: 34.9
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 146..258
e-value: 1.9E-10
score: 40.1
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 17..145
e-value: 3.4E-18
score: 65.2
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 48..242
score: 17.343
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 48..242
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 456..541
e-value: 2.2E-14
score: 52.8

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066559-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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