TCONS_00066588-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066588-protein
Unique NameTCONS_00066588-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length291

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066588-protein ID=TCONS_00066588-protein|Name=TCONS_00066588-protein|organism=Clytia hemisphaerica|type=polypeptide|length=291bp
QDIFQYNFSRSRLLLLVISTVSNNFSLAMKICFAVLLILAVLAIVESRWR
RHRRHHHSKHHHSKHGSSKQVSTGSQGGNHDMNNWDFFMLVQQWPLSSCE
KENVTHEHTCVIPKYVDGWTLHGLWPSTNVEKNYPTECTNEKFDPEEVRD
LKPRMLKYWPNMFVDSDKNHFWAHEYEKHGTCAESVPGFKTEHEFFNSAL
NLRDEHDIGNILASQGITPRDQPYEGSDLNDALNKGLGKTGCVQCQKINE
IGYVISAAVVCLSKSKEVIDCPYCEHKCLDEEKVYYQPIRG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041640XLOC_041640Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066588TCONS_00066588Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001568RNase_T2-like
IPR018188RNase_T2_His_AS_1
IPR033130RNase_T2_His_AS_2
IPR033697Ribonuclease_T2_eukaryotic
Vocabulary: Molecular Function
TermDefinition
GO:0033897ribonuclease T2 activity
GO:0003723RNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0033897 ribonuclease T2 activity
molecular_function GO:0003723 RNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001568Ribonuclease T2-likeGENE3D3.90.730.10coord: 76..287
e-value: 5.8E-53
score: 179.6
IPR001568Ribonuclease T2-likePFAMPF00445Ribonuclease_T2coord: 87..271
e-value: 4.2E-49
score: 167.1
IPR001568Ribonuclease T2-likeSUPERFAMILY55895Ribonuclease Rh-likecoord: 84..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..76
IPR018188Ribonuclease T2, His active site 1PROSITEPS00530RNASE_T2_1coord: 119..126
IPR033130Ribonuclease T2, His active site 2PROSITEPS00531RNASE_T2_2coord: 171..182
IPR033697Ribonuclease T2, eukaryoticCDDcd01061RNase_T2_eukcoord: 85..286
e-value: 2.06139E-57
score: 184.073

Blast
[Close]
BLAST of TCONS_00066588-protein vs. Swiss-Prot (Human)
Match: RNT2 (Ribonuclease T2 OS=Homo sapiens GN=RNASET2 PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 5.550e-29
Identity = 65/195 (33.33%), Postives = 101/195 (51.79%), Query Frame = 0 
Query:   80 HDMNNWDFFMLVQQWPLSSCEKENVTHEHTCVIPKYVDGWTLHGLWP--STNVEKNYPTECTNEKFDPEEVRDLKPRMLKYWPNMFVD-SDKNHFWAHEYEKHGTCAESVPGFKTEHEFFNSALNLRDEHDIGNILASQGITPRDQPYEGSDLNDALNKGLGKTGCVQC--QKINEIGYVISAAVVCLSKSKEVI 269
             D + W   ++VQ WP + CEK     ++ C  P   D WT+HGLWP  S    +++P       F+ EE++DL P M  YWP++     +++ FW HE+EKHGTCA  V    ++ ++F  +L L  E D+ ++L   GI P    Y+ +D  DAL +  G    +QC     +E    I    +CL+K  + +
Sbjct:   29 RDNHEWKKLIMVQHWPETVCEK----IQNDCRDPP--DYWTIHGLWPDKSEGCNRSWP-------FNLEEIKDLLPEMRAYWPDVIHSFPNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELYRELDLNSVLLKLGIKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQTIGQIELCLTKQDQQL 210
The following BLAST results are available for this feature:
BLAST of TCONS_00066588-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RNT25.550e-2933.33Ribonuclease T2 OS=Homo sapiens GN=RNASET2 PE=1 SV... [more]
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