TCONS_00066765-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066765-protein
Unique NameTCONS_00066765-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length548

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066765-protein ID=TCONS_00066765-protein|Name=TCONS_00066765-protein|organism=Clytia hemisphaerica|type=polypeptide|length=548bp
MLIPMSQLAICPGNCSGNGVCLSGTCLCEVQYSGGSCDHTNIGYFVTFGL
FFYLICLGAILQLVLCMWSDFTRSKRNCLHHAFRPSIQKLIYLAVICATG
SRAVYFTLGLLDLSKVTFQENLFSTFYPFVLSGMFLIICFWAETFHVSGL
KLDRPRFLTKSFVAFVIMNFMVYGMLVMQYVGNHLLNEKLKVKLNEVVNG
SFAVLMLISLVFFLIYGVEIFCKVEGAFKPDTLAVQKQVNVNFYQLFVSR
FGLVMQAGFLLAVTVFLMSEVLSKMWKEKLPIGERNIFNIAYHVAELAVV
LWFPCCLWNVYKPGELWILNPQKILDLGRVRKEAEQQAHEQAPIVRASPT
PSNYNTFSSEDDNETDDEDEEDYDGNRDCWICYDDEKIEHLIQPCDCKGG
TKYVHHTCLKKWLMERPSENEKETISCSVCKAQYNVEKDTSVVWLPSGQK
VRAWSQTLIVAVTMILLPVSLFLMWKRIPYDPLKVGMAFALFFGELILAK
FLGFNFVNAYSVTKRSALRILSKKETRHSRSNGYSDENNSISSVSVTS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041751XLOC_041751Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066765TCONS_00066765Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011016Znf_RING-CH
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 378..431
e-value: 1.1E-13
score: 61.5
IPR011016Zinc finger, RING-CH-typePFAMPF12906RINGvcoord: 379..430
e-value: 7.4E-13
score: 48.3
IPR011016Zinc finger, RING-CH-typePROSITEPS51292ZF_RING_CHcoord: 371..437
score: 20.535
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 372..437
e-value: 1.8E-15
score: 56.0
NoneNo IPR availableGENE3D2.60.40.1510coord: 5..38
e-value: 2.3E-4
score: 21.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 338..373
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 529..548
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 376..435

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00066765-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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