TCONS_00066797-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066797-protein
Unique NameTCONS_00066797-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1543

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066797-protein ID=TCONS_00066797-protein|Name=TCONS_00066797-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1543bp
MGDEDDVYAEQLKEVFKSCDLDNKGYINRNELIDLSQKLQLGDQVGDLLK
EILGDEFTDGKVTFEDFREGFVNVLANAIDCLGDEETEDQSEWSEAGNRL
STITATTDKDRQKVSPAHHAKVSKTQSGEVKPSQQPPQQHVKAQKTWSNT
SLSQSFEAGGDESAIQMRQIWDDLAVGESGYINLLQLSIVCEHIGMEGMA
DDELEALFTELDKNGDGLVSLREFMDGLFLSTKRPRSDRSMFSPRSEKSV
ISPKNETLVVSSRNSEQSLVNLAPVNEVKLEGSLETLVDMENDLETPRME
EVLEAEVVEETFSSPPSSLAKRKSLEMAASNPDLSSTDIFYSLDPNDTGK
ISYNDLIMYLKENNLEELEIIAKVLRKDGQGKIKNRDLSLQLEKLVFQQQ
HDALTKSVLLVYKKEIAKLREEAMRSRDQMEDLKNQSELLDEHNQTLAKE
NEEQIKMALEESQNRIREQEANFEERLATREHELLRQRDVMLKEHEKEKN
ELRQRLDEIKSDDSKTKNKLKEAAMEISKLEENLNITISELNEERKQSSR
LQEVAQSEKVLKQRIIDLDSQLTSLADLRTNQKERIQQLEGINKTLQRQN
EEHESQIMELQNELNHKQKELDEQVQNSIPRMTRDGSNLSDYMKPELAQS
NNQEMEELQSQIQDQNDIIKNLRNELDTVTHSMNEKHGREINRLTDKYAS
EIAELQMSLSAERTENTEKRSTEKSSLIEYYEDQMTELKKTFDKEKENLL
NSHQHEQKRWQSERIPSGDFHSRERWEDLFHVEKEEIELKYKREITLLEE
KIMVLETEKAELELKFLNEKSEIEQQFRIERSELLQNASSASQENEHFQK
HVQALKDEHAKRQSNALRDAKDEHKREKEKLREKFESELDKMRSEYEKEL
NGERKEHSGQVSKLRKEFELDKASLVEGFNRERTEMEQSSKRKLKETEDT
LKQNYDHDLSTQLSKIRKVSLEERAKVEEDLRSEKYEICQSLQNDKTELE
IRIKQVENDLEVSFADEKARLIREFELEKSLMEQQHQKEIAELQQAFSTG
EAGIKNKVKENFQKMLQEQKQELEDSYRVEKEQLVFSFNREKAALQSGWQ
LQRLTLEEGFTKAKDEMESAFKREKHDLIEKSRKQKSKFEELYRKQNEKI
SEDQSKEIEERVKRETDRLESSNTHLGKENNLLREQKKELETRNQVLELK
SLSVKQEGSEAKQYLNQKNELVEKIKTLSETVYRLETDNTRLLNEKKDME
HDKDTILENSVHEITDRESKITSLLKEKSDLETKLHCLMAAVNENEKMKD
QAMQMQEEAMEMKQSLTSLQELKNVNQSLKEMVQSYQRKEKENKVSSREK
DSTINRLEDAVKQLNVQTTAAATEKSRCLREIQELKDQLLRANASSDRDN
ALKDKVFNDAKAEVMNLNKKLDQKSKKINSLEESLQQMEGDLFELDSERK
QLDEQVQHWKNEATENKEKVRQERKNSTTKSVRSDTLVTELYVENADLMK
QIANAESNHSKAEKQVRQLTDQKRALQRVISKLCNSYGITNLS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041766XLOC_041766Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066797TCONS_00066797Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1173..1231
NoneNo IPR availableCOILSCoilCoilcoord: 989..1009
NoneNo IPR availableCOILSCoilCoilcoord: 1488..1529
NoneNo IPR availableCOILSCoilCoilcoord: 1375..1395
NoneNo IPR availableCOILSCoilCoilcoord: 1059..1083
NoneNo IPR availableCOILSCoilCoilcoord: 1129..1149
NoneNo IPR availableCOILSCoilCoilcoord: 648..682
NoneNo IPR availableCOILSCoilCoilcoord: 728..748
NoneNo IPR availableCOILSCoilCoilcoord: 860..917
NoneNo IPR availableCOILSCoilCoilcoord: 579..627
NoneNo IPR availableCOILSCoilCoilcoord: 1407..1480
NoneNo IPR availableCOILSCoilCoilcoord: 1022..1042
NoneNo IPR availableCOILSCoilCoilcoord: 485..558
NoneNo IPR availableCOILSCoilCoilcoord: 788..822
NoneNo IPR availableCOILSCoilCoilcoord: 1347..1367
NoneNo IPR availableCOILSCoilCoilcoord: 409..479
NoneNo IPR availableCOILSCoilCoilcoord: 838..858
NoneNo IPR availableCOILSCoilCoilcoord: 1288..1342
NoneNo IPR availableGENE3D1.20.5.50coord: 589..691
e-value: 7.2E-4
score: 18.7
NoneNo IPR availableGENE3D1.10.238.10coord: 351..395
e-value: 3.0E-4
score: 20.1
NoneNo IPR availableGENE3D1.10.1330.10coord: 28..86
e-value: 1.2E-5
score: 24.5
NoneNo IPR availableGENE3D1.10.238.10coord: 5..27
e-value: 0.029
score: 14.1
NoneNo IPR availableGENE3D1.20.5.50coord: 485..588
e-value: 0.15
score: 11.3
NoneNo IPR availableGENE3D1.20.5.340coord: 1405..1537
e-value: 2.2E-6
score: 27.0
coord: 1199..1321
e-value: 0.05
score: 12.9
NoneNo IPR availableGENE3D1.10.238.10coord: 215..350
e-value: 3.1E-5
score: 23.4
NoneNo IPR availableGENE3D1.10.238.10coord: 116..214
e-value: 8.7E-10
score: 38.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1150..1174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 856..886
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1460..1482
IPR002048EF-hand domainSMARTSM00054efh_1coord: 335..363
e-value: 96.0
score: 1.8
coord: 11..39
e-value: 5.1E-4
score: 29.3
coord: 203..231
e-value: 0.0019
score: 27.4
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 194..229
e-value: 1.3E-5
score: 24.7
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 7..42
score: 11.11
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 59..77
score: 7.177
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 199..234
score: 12.31
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 162..197
score: 6.117
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 331..366
score: 8.683
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 344..356
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 212..224
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 160..229
coord: 9..76
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 338..401
coord: 732..749

Blast
[Close]
BLAST of TCONS_00066797-protein vs. Swiss-Prot (Human)
Match: NINL (Ninein-like protein OS=Homo sapiens GN=NINL PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 2.194e-28
Identity = 87/269 (32.34%), Postives = 135/269 (50.19%), Query Frame = 0 
Query:    1 MGDEDDVYAEQLKEVFKSCDLDNKGYINRNELIDLSQKLQLGDQVGDLLKEILG-DEFTDGKVTFEDFREGFVNVLANAIDCLGDEETE----------------DQSEWSEAGNRLSTITATTDKDR------QKVSPAHHAKVSKTQSGEVKPSQQPPQQHVKAQ----------KTW-------SNTSLSQSFEAGGDESAIQMRQIWDDLAVGESGYINLLQLSIVCEHIGMEGMADDELEALFTELDKNGDGLVSLREFMDGLF 229
            M +E++ Y  QL+EV+ SCD    G+++R EL  L  KL L  Q+  LL+ +LG D F   +V FE+F+EGFV VL++       +E                  + S+W    +R     A T+  R      Q    +H  + +  +S E   S +  +   +AQ          +TW          S S SF    D    Q+R +W++L VG SG+++  +L++VC+ +G++G+  +ELE LF +LD++GDG VSL EF  GLF
Sbjct:    1 MDEEENHYVSQLREVYSSCDTTGTGFLDRQELTQLCLKLHLEQQLPVLLQTLLGNDHFA--RVNFEEFKEGFVAVLSSNAGVRPSDEDSSSLESAASSAIPPKYVNGSKWYGRRSRPELCDAATEARRVPEQQTQASLKSHLWRSASLESVESPKSDEEAESTKEAQNELFEAQGQLQTWDSEDFGSPQKSCSPSF----DTPESQIRGVWEELGVGSSGHLSEQELAVVCQSVGLQGLEKEELEDLFNKLDQDGDGKVSLEEFQLGLF 263
The following BLAST results are available for this feature:
BLAST of TCONS_00066797-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NINL2.194e-2832.34Ninein-like protein OS=Homo sapiens GN=NINL PE=1 S... [more]
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