Hlh-3 (polypeptide) - C. hemisphaerica

Overview
NameHlh-3
Unique NameTCONS_00066822-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length425

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066822-protein ID=TCONS_00066822-protein|Name=Hlh-3|organism=Clytia hemisphaerica|type=polypeptide|length=425bp
MSKRKFIEVEFSDQSPTLSTKYPPLIGRERDHVIAQPVKKKKNSFHVDNL
LAEKTGSKKVEYLRPSHEEEKHPSPSVTPIHFTGSAFQRLYKKADDWSVY
DRLRGGEHTGERCTKPCCGGENINLTKYPSSIHYYRSRESGSTDSAGSSC
NSHKDFPIESEAFSKRRREAFEEDLSYHRQHHYKELRFPYEYERRDYPTY
YQEPPRASSKPCACADCHLPKDYGNKKKESKIKQVNVIYRNDRDVYSERK
PLSKRKALLNELENKVNQRSTRAEFPIDRALLIDSKQIKEEEEEIEVVDH
NESPPLKHGTNIKRKSEEVLKLPAGPGRNRAVANLLERRRVAELNTAFEK
LRILIPCYGNEDRALSKIKTLKYALTYMAHLMTIVREQTVVGHFNTENDF
HKLSKHDPLIQKCREHMFRKKIFMK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041785XLOC_041785Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066822TCONS_00066822Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046983 protein dimerization activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 334..387
e-value: 2.5E-10
score: 50.3
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 330..381
e-value: 8.2E-12
score: 44.8
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3D4.10.280.10coord: 314..390
e-value: 1.7E-11
score: 43.4
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 328..381
score: 13.052
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainCDDcd00083HLHcoord: 326..381
e-value: 2.90608E-7
score: 46.4383
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 326..389

Blast
The following BLAST results are available for this feature:
BLAST of Hlh-3 vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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