TCONS_00066903-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00066903-protein
Unique NameTCONS_00066903-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length606

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00066903-protein ID=TCONS_00066903-protein|Name=TCONS_00066903-protein|organism=Clytia hemisphaerica|type=polypeptide|length=606bp
LDKKNKLNKVMGNQIHVCIMNNIIPINSQIANLARDILDADDFAKPSLLL
KLKEITSSQSQDQEITLIEIWRCRLPNAVIQALRLDFTKVSGMWLTACQL
INTAVECCFFNPRYLQEIKKEYIPALIQESLNICRSIVKEYQTSSDMFKI
NLCANLSWIITSINTLMKSFVFVSVLVVASKHFLQFLMSEDDRISLLSLS
LLKNIIETNSDVFYHAAESRMHNVADELAYKISSTKDKKVARMTVSILLN
LLRLYSSLLDLFVTKRYRGFKMYLNKWKGNGFDENIEYIMGMLEEKAEKM
KSSQRHHNAAIVIQSFYRGCKTRNKLKTATLAMSKFQQSYRKKIETKQTL
DEKKRLDKVKKDHDERQRRKGFVKSKTKQLQSIEGIPAKTVDTFLDNLQQ
ESARKIQASWSGWKTRKVMREIAPHLVKEKAAILLQRQIRRWLEKVRKVK
QDARLDMIPDGLNDERRIELSNVLVNIREKFPKVDVSDEELIQGHLKANQ
MLNNHVIGLRSMRRRDDHRRALIGQLTIQSETLSRMPNLSSANEMTLEQL
ASRSTPVMVAARKQHVEFINDLKRPWWDRLSDESAVEDPNRPTVLGSHVI
DYEKNF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041829XLOC_041829Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00066903TCONS_00066903Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000048IQ motif, EF-hand binding siteSMARTSM00015iq_5coord: 305..327
e-value: 0.008
score: 25.4
coord: 398..420
e-value: 9.6
score: 13.8
coord: 427..449
e-value: 61.0
score: 7.2
IPR000048IQ motif, EF-hand binding sitePFAMPF00612IQcoord: 307..327
e-value: 1.2E-4
score: 21.5
coord: 429..444
e-value: 0.038
score: 13.7
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 306..335
score: 8.096
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 399..428
score: 6.888
NoneNo IPR availableGENE3D4.10.270.10coord: 409..458
e-value: 2.2E-4
score: 20.5
NoneNo IPR availableGENE3D1.20.5.190coord: 237..327
e-value: 2.1E-6
score: 27.1
coord: 329..408
e-value: 0.0065
score: 15.9
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 95..370

Blast
[Close]
BLAST of TCONS_00066903-protein vs. Swiss-Prot (Human)
Match: IQCB1 (IQ calmodulin-binding motif-containing protein 1 OS=Homo sapiens GN=IQCB1 PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.141e-48
Identity = 151/577 (26.17%), Postives = 278/577 (48.18%), Query Frame = 0 
Query:   27 NSQIANLARDILDADDFAKPSLLLKLKEI---TSSQSQDQEITLIEIWRCRLPNAVIQALRLDFTKVSGMWLTACQLINTAVECCF-FNPRY-LQEIKKEYIPALIQESLNICRSIVKEYQTSSDMFKINLCANLSWIIT-SINTLMKSFVFVSVLVVASKHFLQFLMSEDDRISLLSLSLLKNIIETNSDVFYHAAESRMHNVADELAYKISSTKDKKVARMTVSILLNLLRLYSSLLDLF-VTKRYRGFKMYLNKWK-GNGFDENIEYIMGMLEEKAEKMKSSQRHHNAAIVIQSFYRGCKTRNKLKTATLAMSKFQQSYRKKIETKQTLDEKKRLDKVKKDHDERQRRKGFVK-----SKTKQLQSIEGIPAKTVDTFLDNLQQESARKIQASWSGWKTRKVMREIAPHLVKEKAAILLQRQIRRWLEKVRKVKQDARLDMIPDGLNDERRIELSNVLVN-IREKF--PKVDVSDEELIQGHLKANQMLNNHVIGLRSMRRRDDHRRALIGQLTIQSETLSRMPNLSSANEMTLEQLASRSTPVMVAARKQHVEFINDLKRPWWDRLSDESAVE 587
            + +I ++A ++  + +   P +LLKLKEI   T   S + +    +I+   L    +  L  D++++ G W T  QL      CC    P    +E   E +P+  +  L + R +   +  ++   + +   +   I+T S+  L+   V +   V+ S HFL  L +++ +I    + +L+NI++ NS          ++++ DE+ +K+ ST    +      +LL +   +  +L L   +  Y+G +  L+K + G  F + +  ++G+L     +    Q+ H AA +IQ++++G +TR +LK    A+   Q+S+R K  +K  L+    +++ K++ D + + +   +     S+  QL  +E +    V+     ++++SA  IQ  W G++ RK   +    L++ KAA+ LQR   ++L K RK K+          L D RR+EL   + + +R     P  DV   EL   H +A + L ++ +G     R   HR ALI Q++   E L + P+L  A     E   SRS PV   A++ H+  +  ++ PWW +L +ES  E
Sbjct:    7 DPRILSIAAEVAKSPEQNVPVILLKLKEIINITPLGSSELKKIKQDIYCYDLIQYCLLVLSQDYSRIQGGWTTISQLTQILSHCCVGLEPGEDAEEFYNELLPSAAENFLVLGRQLQTCFINAAKAEEKDELLHFFQIVTDSLFWLLGGHVELIQNVLQSDHFLHLLQADNVQIGSAVMMMLQNILQINSGDLLRIGRKALYSILDEVIFKLFSTPSPVIRSTATKLLLLMAESHQEILILLRQSTCYKGLRRLLSKQETGTEFSQELRQLVGLLSPMVYQEVEEQKLHQAACLIQAYWKGFQTRKRLKKLPSAVIALQRSFRSK-RSKMLLE----INRQKEEEDLKLQLQLQRQRAMRLSRELQLSMLEIVHPGQVEKHYREMEEKSALIIQKHWRGYRERKNFHQQRQSLIEYKAAVTLQRAALKFLAKCRKKKKLFAPWRGLQELTDARRVELKKRVDDYVRRHLGSPMSDVVSREL---HAQAQERLQHYFMGRALEERAQQHREALIAQISTNVEQLMKAPSLKEAEGKEPELFLSRSRPVAAKAKQAHLTTLKHIQAPWWKKLGEESGDE 575
The following BLAST results are available for this feature:
BLAST of TCONS_00066903-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IQCB11.141e-4826.17IQ calmodulin-binding motif-containing protein 1 O... [more]
back to top