TCONS_00067195-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067195-protein
Unique NameTCONS_00067195-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length631

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067195-protein ID=TCONS_00067195-protein|Name=TCONS_00067195-protein|organism=Clytia hemisphaerica|type=polypeptide|length=631bp
MVLKTAFYIFIVQVLCFKTYETCKCEQSDIAFCYRSIDPHRDIPTECHAG
LKCDCRSKNLTTFPTKLSQTPDRVIWLNLADNLLTNITREDLGTFTGLRF
LDLTQNPIQFIGSKTFLNSSGLIDLRIQTDSLKYNSLRGLRSLRELRING
NGILPELPTKVMSHLKDLIHLVISNTAVKKLPENFMNGYKQLLILDMRDN
KIDSVDAGAFNNTPNIRELHLSHNHIKTVHHTIIKHASKLKALDLSHNDL
TSFDNDFLANIPELYLLDLSHNKLVNITLNIPILTLDLSSNAITTTDDMH
FSNSCWIQNLNVANNSIIKLTRFYQIDKDLIPSQYTTKLQKVDFSYNGIQ
TIDSDVFERFYELKKLNLETNLLSNIDHLILSRNVFRLYLADNKFTRFPN
IIDKLKFISWLDLSNNNIKDIPLKKLVDLISLRYLNLKNNLLSHLPVDFL
SGTKLYDSFDLSDNPLVCTCALRNILTLSTTENAIILGNCTENETITIDL
KVFKDIANYNNITTAKSTAKPDPIDTTSTMTETLPDETTTKQKMTTISSP
TKGKLPATRKTTTSESLRKEFTTSIVFNVILAVVVLLLIFLVVVLYVKYK
KVYSLNAYHTKRDTVQMENTHDKIAYSTEEN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041978XLOC_041978Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067195TCONS_00067195Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675L_dom-like
IPR001611Leu-rich_rpt
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00019LEURICHRPTcoord: 240..253
score: 52.27
coord: 261..274
score: 49.67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 536..561
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 189..212
e-value: 55.0
score: 7.2
coord: 360..383
e-value: 100.0
score: 5.0
coord: 429..452
e-value: 0.1
score: 21.7
coord: 238..260
e-value: 79.0
score: 5.9
coord: 213..236
e-value: 18.0
score: 11.1
coord: 140..164
e-value: 82.0
score: 5.8
coord: 336..359
e-value: 83.0
score: 5.7
coord: 95..118
e-value: 11.0
score: 13.1
coord: 261..284
e-value: 200.0
score: 2.7
coord: 405..425
e-value: 180.0
score: 2.9
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 16..203
e-value: 8.1E-24
score: 83.2
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 204..327
e-value: 1.9E-20
score: 72.3
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 328..566
e-value: 1.2E-25
score: 89.5
IPR032675Leucine-rich repeat domain, L domain-likeSUPERFAMILY52058L domain-likecoord: 285..472
IPR032675Leucine-rich repeat domain, L domain-likeSUPERFAMILY52058L domain-likecoord: 43..319
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 410..466
e-value: 5.4E-7
score: 29.2
coord: 338..395
e-value: 2.5E-6
score: 27.1
coord: 214..274
e-value: 2.9E-12
score: 46.1
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 384..405
score: 5.332
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 142..161
score: 4.739
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 215..236
score: 6.103
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 362..383
score: 7.188
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 73..94
score: 5.017
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 239..260
score: 7.581
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 407..427
score: 7.404
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 263..285
score: 6.611
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 191..212
score: 5.848
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 338..359
score: 6.187
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 431..451
score: 7.304
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 97..118
score: 7.088

Blast
[Close]
BLAST of TCONS_00067195-protein vs. Swiss-Prot (Human)
Match: ALS (Insulin-like growth factor-binding protein complex acid labile subunit OS=Homo sapiens GN=IGFALS PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.274e-21
Identity = 118/472 (25.00%), Postives = 191/472 (40.47%), Query Frame = 0 
Query:   92 LGTFT---GLRFLDLTQNPIQFIGSKTFLNSSGLIDLRIQTDSLKY---NSLRGLRSLRELRINGNGILPELPTKVMSHLKDLIHLVISNTAVKKLPENFMNGYKQLLILDMRDNKIDSVDAGAFNNTPNIRELHLSHNHIKTV-----------------HHTIIKHASK-------LKALDLSHNDLTSFDNDFLANIPELYLLDLSHNKLVNITLNI-----PILTLDLSSNAITTTDDMHFSNSCWIQNLNVANNSIIKLTRFYQIDKDLIPSQYT--TKLQKVDFSYNGIQTIDSDVFERFYELKKLNLETNLLSNIDHLILSR--NVFRLYLADNKFTRFP-NIIDKLKFISWLDLSNNNIKDIPLKKLVDLISLRYLNLKNNLLSHLPVDFLSGTKLYDSFDLSDNPLVCTC--------ALRNILTLSTTENAIILGNCTENETITIDLKVFKDIANYNNITTA 515
            LGTF     L  L L+ N +  +    F     L DL +  +SL      + RGL SLREL + GN  L  L   + S L +L  L +S  A++ +  N      +L  L +  N I +V  GAF     +R L LSHN +  +                 H+ I     +       L+ L L HN +          + +L +L L HN+L  +          +  ++LS N +    +  F     + +L++  + + ++           P  +T  + L+++    NG+  I+        EL +L+L +N L+++ H +      +  L L+ N+    P + +  L+   WLD+S+N ++ +P   L  L  LRYL+L+NN L      F       +   L  NP  C C        AL+N   +     AI  G+  +    T           YNNIT A
Sbjct:  139 LGTFAHTPALASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGN-RLAYLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKLHSLHLEGSCLGRIR----------PHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYLLLSRNRLAELPADALGPLQRAFWLDVSHNRLEALPNSLLAPLGRLRYLSLRNNSLR----TFTPQPPGLERLWLEGNPWDCGCPLKALRDFALQNPSAVPRFVQAICEGDDCQPPAYT-----------YNNITCA 584
The following BLAST results are available for this feature:
BLAST of TCONS_00067195-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ALS4.274e-2125.00Insulin-like growth factor-binding protein complex... [more]
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